| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2476 |
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| Symbol | |
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| ID | 5107352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2741230 |
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| End bp | 2741913 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503720 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001187964 |
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| Protein GI | 146307499 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.210757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.512741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATTC TGGTCATCGA AGACAACCGA GACATTCTCG CCAACGTGCT CGACTATCTG
CAGCTCAAGG GCTTCTCCGT GGACTGCGCG CAAGACGGCC TGAGCGGCCT GCACCTGGCC
AGCAGCGGTC ATTACGACCT GATCGTGCTG GACATCATGC TGCCCGGCAT CGACGGCTAT
CAGGTATGCA AGCGCCTGCG CGAGGATGGT CGCAGCGAAG TGCCGATTCT GATGCTCACT
GCGCGAGATG CGCTGGATGA TCGCCTGAAA GGACTCAATG CCGGTGCCGA CGATTACCTG
ATCAAGCCCT TCGCCCTGTC CGAGCTGGTG GCGCGCATCG AGGCGATCCT GCGCCGCAGC
CGCGGCAGCC GCAAACGCCA GCTGCAGGTC GCCGACCTTA GCTACGACCT CGATACCCTG
CACGTCAGCC GCGCCGGCCA GGCGCTCAAA CTCAACCCGC TGGGCCTCAA GCTGCTGGCC
ATTCTCATGC AGCGCAGCCC GGCCGTGGTG CGCCGTGAGG CGCTGGAAGA GGCGCTGTGG
GGCGACGACT GCCCGGACAG CGACAGCCTA CGCAGCCACG TTCACCAGTT GCGCCAGGTG
CTCGACAAAC CCTTCCCTAC GCCTTTGCTG CACACCATTC ACGGCGTCGG TTATCGCCTG
GCGGAGAGCG CCGATGCTGT CTAA
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| Protein sequence | MRILVIEDNR DILANVLDYL QLKGFSVDCA QDGLSGLHLA SSGHYDLIVL DIMLPGIDGY
QVCKRLREDG RSEVPILMLT ARDALDDRLK GLNAGADDYL IKPFALSELV ARIEAILRRS
RGSRKRQLQV ADLSYDLDTL HVSRAGQALK LNPLGLKLLA ILMQRSPAVV RREALEEALW
GDDCPDSDSL RSHVHQLRQV LDKPFPTPLL HTIHGVGYRL AESADAV
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