Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2473 |
Symbol | |
ID | 5107349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2737756 |
End bp | 2738436 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503717 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001187961 |
Protein GI | 146307496 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.668648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAT TTCTACAGGG CCTGCGGCTG GCGCTGGCCT CGCTGGTGTT TTTGGGCGCG TTGTTGGCGC TGCCGTTGAG CATGGCCTGG GCTGCCACCA CTGCGCCGGT ACCCGGGCAG AGCGCGCGTC CGGTCAACTG GGCGCAACCG CTGGACAGCC GCATCAACCT CTATCGCATG ACGCCTGATC TCTATCGCAG CGCCTTGCCG AGTGCCGGGG ACTTGCCACA GCTGCAGGCC CTGGGCATCG CCACGGTGAT CAACTTCTAT CAGCGCGGCG ATGAGCAGTG GCTGAAGGAT CCCAGGGTTG TTCAGGTGCA TCTGCCGCTG CGTACCGACC GTATCGATGA TGCCGACGTC ATCGAAGTGC TACGCAGCAT TCGCCAGGCG CAAAGCCGTG GCCGCGTTCT GATTCACTGC AAGCACGGGC AGAATCGTAC GGGGCTCATT GCCGCCATGT ACCGGGTGAT CTACCAGAAC TGGAGCAAGG AGCAGGCGCT GGCGGAAATG CGTGGCGGTG GCTTTGGTGG CCAGGAGCGC ATGGACGACG CCGAGCGTTA CCTGCGCGAG TCCGACATAC CGACGTTGCG TTCGGCCTTG GCTAATGGCG CCTGCAGCAC CAGCCCCTGG GCGCTGTGCG CGCTCAAGGA TCGTCTACTG GGCTCGGTCG AAGGCGCATG A
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Protein sequence | MNRFLQGLRL ALASLVFLGA LLALPLSMAW AATTAPVPGQ SARPVNWAQP LDSRINLYRM TPDLYRSALP SAGDLPQLQA LGIATVINFY QRGDEQWLKD PRVVQVHLPL RTDRIDDADV IEVLRSIRQA QSRGRVLIHC KHGQNRTGLI AAMYRVIYQN WSKEQALAEM RGGGFGGQER MDDAERYLRE SDIPTLRSAL ANGACSTSPW ALCALKDRLL GSVEGA
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