Gene Pmen_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2473 
Symbol 
ID5107349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2737756 
End bp2738436 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID640503717 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_001187961 
Protein GI146307496 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.668648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAT TTCTACAGGG CCTGCGGCTG GCGCTGGCCT CGCTGGTGTT TTTGGGCGCG 
TTGTTGGCGC TGCCGTTGAG CATGGCCTGG GCTGCCACCA CTGCGCCGGT ACCCGGGCAG
AGCGCGCGTC CGGTCAACTG GGCGCAACCG CTGGACAGCC GCATCAACCT CTATCGCATG
ACGCCTGATC TCTATCGCAG CGCCTTGCCG AGTGCCGGGG ACTTGCCACA GCTGCAGGCC
CTGGGCATCG CCACGGTGAT CAACTTCTAT CAGCGCGGCG ATGAGCAGTG GCTGAAGGAT
CCCAGGGTTG TTCAGGTGCA TCTGCCGCTG CGTACCGACC GTATCGATGA TGCCGACGTC
ATCGAAGTGC TACGCAGCAT TCGCCAGGCG CAAAGCCGTG GCCGCGTTCT GATTCACTGC
AAGCACGGGC AGAATCGTAC GGGGCTCATT GCCGCCATGT ACCGGGTGAT CTACCAGAAC
TGGAGCAAGG AGCAGGCGCT GGCGGAAATG CGTGGCGGTG GCTTTGGTGG CCAGGAGCGC
ATGGACGACG CCGAGCGTTA CCTGCGCGAG TCCGACATAC CGACGTTGCG TTCGGCCTTG
GCTAATGGCG CCTGCAGCAC CAGCCCCTGG GCGCTGTGCG CGCTCAAGGA TCGTCTACTG
GGCTCGGTCG AAGGCGCATG A
 
Protein sequence
MNRFLQGLRL ALASLVFLGA LLALPLSMAW AATTAPVPGQ SARPVNWAQP LDSRINLYRM 
TPDLYRSALP SAGDLPQLQA LGIATVINFY QRGDEQWLKD PRVVQVHLPL RTDRIDDADV
IEVLRSIRQA QSRGRVLIHC KHGQNRTGLI AAMYRVIYQN WSKEQALAEM RGGGFGGQER
MDDAERYLRE SDIPTLRSAL ANGACSTSPW ALCALKDRLL GSVEGA