| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2468 |
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| Symbol | |
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| ID | 5107344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2731890 |
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| End bp | 2733785 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503712 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001187956 |
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| Protein GI | 146307491 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.633599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC GTCGCGGCTG GAACATTCAC ACCCGCACCC AGCTGATCAG CGTGGGCCCC
GCCCTGCTGC TGACGCTGCT GCTGACCGGT TTTCTCACCT TCACCCGCCT GCAGGATCTG
CGCCTGGAGC AGGGTCATAC CGGTCAATTG ATTGCCAACC AGCTCGCGCC CGCCACCCAG
TACGGCGTGC TCAATGACAA TCTGAACACC CTGGAAAGCC TGCTACGGGC CACCTTGAGC
ACTCCCGACG TGCGCTTTGC CGAGGTGCGC GACCGCGACG ACAACATCCT GGTCTACGTC
GAACGCCCCA AGGAGCAGGG GCACAGCACC GCGCAGGTGG AGGTATTTCA GGCACCGATT
CACTTGCAAG GTCCGCCAGG CCGTGAATGG CCATTGCCGC CGGGCAGGTC ACTCGGCGAC
GGCTATCTGG GTCGGGTGAT CGTAGGCATA TCCAATGACA CCTTCAGCAC CCGTCAGCAG
GAAATCCTGC TCAAGGCCGG GGTTCTGTCG CTGTTCGCCC TGCTGCTGAC CTTTCTTCTC
GCCAGACGCC TGGCCCGGCG CCTGGCGCAG CCCCTGAGCG CCATGGGCCA GGCGCTGGAG
CGCATCCAGA GCGGCGATTA CCGGCCCTCG CTGATCGAAC GCGGCAACGA CGAGCTGACC
GATCTCGCCC GGCATATCAA CAACCTCGCC TGCGCCCTGG AGCAGAGCGG TCGTGAGCAG
CAACAGGCGA TTGCCGAACT GATCCAGGCC CGCGAGGAGT CGGAACAGGC CAACCGTGCC
AAGTCCGACT TCCTGGCGAT GATGAGCCAC GAACTGCGCA CACCGATGAA CGGCGTGCTG
GGCATGCTGC AGTTGCTGGA AACCACCAGC CTCAACGACG AGCAGACCGA GTACGCCGCC
CTGGCCACCG AATCCACCGA GCATCTGCTC AAGGTGATCA ACGACATCCT CGACTTCTCG
CGCATCGAAC GCGGCGCGCT GGAGCTCGAA GCCATCCCCT TCAACCTGCT GGAGCTGCTG
CAGGGCTCGG TGCAGGTGTT CCAGCACAGC GCCCAGCAGC GGGGCCTGCA GCTGCTGCTG
GAAACCCAGC CGGGCCTGCA GCAGCTCGAA GTGCGCGGCG ACCCCACCCG CATCCGCCAG
ATCCTGGTCA ACCTGATCGG CAATGCGCTG AAGTTCACCG AGGAAGGACA GATTCGCGTC
GAGACCCGCT GGCAGCCACT GGACGACCAG GTGCTGTGGT TCACCTGCGC CGTGCACGAC
AGCGGCATCG GCATCGATGC CGAGCGCCTG GAGCACATGT TCGACGCCTT CCAGCAGGCC
GACACCTCGA TTTCGCGTCG CTATGGCGGC ACCGGTCTCG GTCTGCCCAT CGCTCGCACG
CTGGCCGAAC GCATGGGGGG CACCCTGCAG GCGGAAAGCC AGCTGGGCAA GGGCTCGGTG
TTCACCCTGG AGATTCCGCT GCCGTTCTGC GAGCAAAGCA GGCAGGTGCA GAGCGGCGCC
CACCCCGCCC CCGCCAGCGG TGACGGCCAG GCCGTACTGC TGGTGGAGGA CAACCCGGTC
AACCAGACCG TGATCGAGGC CATGCTGCGC AGCCTGGGCT ATCAGGTCAG CCTGGTCGGC
GACGGCCAGC AGGCGCTGCA GAGCGTCGCC CAGCATGCCT ATGCAGCCAT TCTCATGGAC
TGCCGCCTGC CGCTGATGGA CGGCTATGAA GCGACGCGGC GCATCCGCCA GCAGGCCAGC
GGCCAGCAAA TACCCATCAT CGCCCTCACC GCCAATGCCC TGCAGGGCGA CCGGGAGGCC
TGCCTGGCGG CGGGAATGAA CGATTACCTG GCCAAACCAT TCAAAAGAGC AGACCTGCAA
CGCATCCTGG AGCGCTGGCT GCCAGCCCGA CCATAG
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| Protein sequence | MNQRRGWNIH TRTQLISVGP ALLLTLLLTG FLTFTRLQDL RLEQGHTGQL IANQLAPATQ
YGVLNDNLNT LESLLRATLS TPDVRFAEVR DRDDNILVYV ERPKEQGHST AQVEVFQAPI
HLQGPPGREW PLPPGRSLGD GYLGRVIVGI SNDTFSTRQQ EILLKAGVLS LFALLLTFLL
ARRLARRLAQ PLSAMGQALE RIQSGDYRPS LIERGNDELT DLARHINNLA CALEQSGREQ
QQAIAELIQA REESEQANRA KSDFLAMMSH ELRTPMNGVL GMLQLLETTS LNDEQTEYAA
LATESTEHLL KVINDILDFS RIERGALELE AIPFNLLELL QGSVQVFQHS AQQRGLQLLL
ETQPGLQQLE VRGDPTRIRQ ILVNLIGNAL KFTEEGQIRV ETRWQPLDDQ VLWFTCAVHD
SGIGIDAERL EHMFDAFQQA DTSISRRYGG TGLGLPIART LAERMGGTLQ AESQLGKGSV
FTLEIPLPFC EQSRQVQSGA HPAPASGDGQ AVLLVEDNPV NQTVIEAMLR SLGYQVSLVG
DGQQALQSVA QHAYAAILMD CRLPLMDGYE ATRRIRQQAS GQQIPIIALT ANALQGDREA
CLAAGMNDYL AKPFKRADLQ RILERWLPAR P
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