| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2464 |
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| Symbol | |
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| ID | 5107340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2727957 |
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| End bp | 2729624 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503708 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001187952 |
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| Protein GI | 146307487 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.105323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATG CAATCCGTTT GCCGCTCGAG CTGTTCTACG AACGTGAAGC AAGGCACCCG
AACAAACGCT ACATGGTGCA ACCCCTGGGC GGCGGAAAGC TGCTGGAGCT GAGCTGGGGC
GATGTGGGGG AGCAGGCGCG CCGAGCCGCC AACTGGCTGC GTAGCCGCGA ATTACCGCAG
GGCAGCCGTA TCGCCATCGT CTCGAAGAAC TGCGCGCACT GGATCATCGC CGACCTGGCG
ATCTGGATGG CCGGCCACGT ATCGGTACCG CTCTATCCCA ACCTGACCGC CGACTCCATG
CGGCAGGTGC TGGAGCATTC CGAGGCGGCG CTGGCATTCA TCGGCAAGCT CGACGACTGG
CAGGCCATGG CCCCGGGGCT GCCACAAGGG CTGCCGACCG TCAGCCTGCC GCTGCATCCT
CAGGGCCAGT TCGACTTCAG CTGGGACGAT CTGCAGCGCT GCGCGCCGAT CCAGGACGAC
CCCAAGCCCG CGGCCGATCA GCTGGCCACC ATCATCTACA CCTCCGGCAC CACCGGCGCG
CCGAAAGGGG TGATGCACAA CTTCTCCAAC TTCGGCTTCG CCGCCAGCAA CGCCATCGCG
CTGTTCGGCG TGGGCGAGGA TGACCGCCTG ATCTCCTACC TGCCGTTGTG CCACGTGGCC
GAGCGCATGT TCGTCGAGCT GGCGTCGCTG TATGCCGGGC AGACGATCTT TTTCGCCGAA
AGCCTGGACA CCTTCCTCGA CGACCTCAAG CGTGCCCGGC CGACCGTAAT GTTCGGCGTA
CCGCGGATCT GGACCAAGTT CCAGATGGGG GTGTACGGCA AGATGCCGGC GCACAAGCTC
GACCGTCTGC TCAAGCTGCC GATAATCGGC CGCATCGTCG GGCGCAAGGT GCTCGCCGGC
CTCGGGCTGG ACGCCATTCG CTATGCGCTG TCCGGCGCCG CCCCGGTGCC CGAGGCGTTG
CTTAACTGGT ACCGGCGCCT GGGCATGGAG ATCCAGGAGG TCTATGGCAT GACCGAGAAC
TGCGGTTACT CCCATGTCTG CCGGCCCGGC AAGTTCAAGC AGGGCTGGAT CGGCCAGAAC
AACCCCGGTG TCGAGGTGCG TATCGCCGAG GATGGCGAAG TCCAGGTGCG CAGTGGCGCC
ACCATGCAGG GCTACTACAA AGACCCGGTC AAGACCGCCG AGGCGCTGAC CGCCGACGGC
TTCCTGCGTA CCGGCGACAA GGGCGAGCAG GACGCCGAGG GCAATCTGCG CCTGACCGGA
CGGATCAAGG AAATCTTCAA GACCAGCAAG GGCAAGTACG TGGCGCCGGC GCCGATCGAG
AACCGCATCG GCGAGCATTC GCGCATCGAG CAGGTCTGCG TGGTGGGCGA CGGCTTGCCC
CAGCCGATCG CGCTGTGCGT GCTGTCCGAC GTGGGGCGCC AGGAGGCGGC CAACGACGGT
CGTGCCGAGC TGGAGAGCAG CCTCAAGGCG CTGGTGGAGC AGGTCAATGA CCGCCTCGAT
CATCATGAGC GTCTGCAGGG GCTGGTGCTG GTCCGCGAGG TCTGGGCGGT GGAAAACGGC
TTTCTCACAC CCACGCTGAA GATCAAGCGC GCCGTAATCG AAGGTACCTA CGGCGAGCGT
TTCGCCGAAT GGCAGCAGCG CAGCGAAGTG GTGCTCTGGC ACGATTGA
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| Protein sequence | MADAIRLPLE LFYEREARHP NKRYMVQPLG GGKLLELSWG DVGEQARRAA NWLRSRELPQ
GSRIAIVSKN CAHWIIADLA IWMAGHVSVP LYPNLTADSM RQVLEHSEAA LAFIGKLDDW
QAMAPGLPQG LPTVSLPLHP QGQFDFSWDD LQRCAPIQDD PKPAADQLAT IIYTSGTTGA
PKGVMHNFSN FGFAASNAIA LFGVGEDDRL ISYLPLCHVA ERMFVELASL YAGQTIFFAE
SLDTFLDDLK RARPTVMFGV PRIWTKFQMG VYGKMPAHKL DRLLKLPIIG RIVGRKVLAG
LGLDAIRYAL SGAAPVPEAL LNWYRRLGME IQEVYGMTEN CGYSHVCRPG KFKQGWIGQN
NPGVEVRIAE DGEVQVRSGA TMQGYYKDPV KTAEALTADG FLRTGDKGEQ DAEGNLRLTG
RIKEIFKTSK GKYVAPAPIE NRIGEHSRIE QVCVVGDGLP QPIALCVLSD VGRQEAANDG
RAELESSLKA LVEQVNDRLD HHERLQGLVL VREVWAVENG FLTPTLKIKR AVIEGTYGER
FAEWQQRSEV VLWHD
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