| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2456 |
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| Symbol | |
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| ID | 5107332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2721020 |
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| End bp | 2722030 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503700 |
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| Product | patatin |
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| Protein accession | YP_001187944 |
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| Protein GI | 146307479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AAGTGGCGCT GGTGCTGGGC TCGGGGGGCG CGCGCGGCTA CGCCCATATC
GGCGTGATCG AGGAACTGCA GGCGCGCGGC TATGAAATCG GCTGCATCGC CGGCTGTTCG
ATGGGCGCGG TGGTCGGCGG CATCTTCGCC GCCGGCAAGC TGCGCGAGTA CCGCGAATGG
ACCGAAAGCC TGGATTACCT GGACGTGCTG CGCCTGCTGG ACGTCAGCTT TCGCCTCGGC
GCCATCCGCG GCGAGCGGGT GTTCGGGCGC ATCCACGACA TCGTCGGCGA GATCAATATC
GAGGATCTGT CGATCCCCTT CACCGCGGTG GCCACCGACC TCACCAACCA GCAGGAAATC
TGGTTCCAGG AAGGCTGCCT GCATCAGGCC ATGCGCGCCT CGGCGGCGAT TCCCAGCCTG
TTCACCCCGG TGGTGCAGGG CAAGCGCATG CTGGTCGACG GCGGCCTGCT CAACCCGCTG
CCGATCGTGC CGGTGGTATC CAGCCACTGC GACCTGATCA TCGCGGTCAA CCTCAACGCC
ACCAACCAGA ATCACTACCA GCTGCCGGTG ATCGAACGGC CGGCGGCGCT CAAGGGCCGC
ATCGACCAGT TGATGAGCAG CCTCGGCTCG CGCCTGCCTA ACTTCCGCCG CAAGGGCGAG
GACGATGCCC TGCTGCTGGC CGAGGAGCAG CAGCGCGCCG ATGCCGTCAG CCCGGCTGCC
GCGCCGAGCC GCGCCTGGGA GGATGAGGCG GCGCCGAAGT CCGCCAGTGG CTCGCGGGTG
GCCGAGCTCA CCGGCCCGGC CTCCCTGCTG GAACTGGTCA ACCAGAGCTT CGAGGTGATG
CAGACCTCGC TGGCGCAGTA CAAGATCGCC GGCTATCCGC CGGATGTGCT GATCAACGTG
CCCAAGCGGG CGTGCCGTTT CTTCGAGTTC TACAAGGCGC CGGAGCTGAT CATGCTGGGT
CGGCAGATCG CCCGCGACAC CCTGGACAGG TACGAGCGCG AACGCGGCTG A
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| Protein sequence | MSKKVALVLG SGGARGYAHI GVIEELQARG YEIGCIAGCS MGAVVGGIFA AGKLREYREW
TESLDYLDVL RLLDVSFRLG AIRGERVFGR IHDIVGEINI EDLSIPFTAV ATDLTNQQEI
WFQEGCLHQA MRASAAIPSL FTPVVQGKRM LVDGGLLNPL PIVPVVSSHC DLIIAVNLNA
TNQNHYQLPV IERPAALKGR IDQLMSSLGS RLPNFRRKGE DDALLLAEEQ QRADAVSPAA
APSRAWEDEA APKSASGSRV AELTGPASLL ELVNQSFEVM QTSLAQYKIA GYPPDVLINV
PKRACRFFEF YKAPELIMLG RQIARDTLDR YERERG
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