| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2454 |
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| Symbol | |
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| ID | 5107330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2718762 |
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| End bp | 2719883 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503698 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_001187942 |
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| Protein GI | 146307477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.156444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAGA ACTGCACCGA TTACCGCGAT CTCTTTATCA ACGACCGGCC GATGATGGAT
GCCCGCGCGC CGGTGGAATT TCACAAGGGC GCCTTTCCCG GCGTCATCAA CCTGCCGCTG
ATGAACGACA TCGAGCGGCA GAAGGTCGGC ACCTGCTACA AGCAGCACGG CCAGCAGGCC
GCCATCGAGC TCGGGCATCA GCTGGTCAGC GGCCGTACCA AGGCCGAACG CATCGAGGCC
TGGGCGAGTT TTGCCAAGGC CAATCCCGAT GGCTACCTGT ACTGCTTCCG CGGTGGCCTG
CGCTCGCAGA TCGTGCAGCA ATGGCTGAAA AGCGAGGCGG GCATCGATTA CCCGCGGGTG
ATCGGGGGCT ACAAGGCCAT GCGCGGCTTT CTCCTGGAGA CCACCGAGCA GGCAGTGGCC
GAGTGCGATT TCGTCCTGGT CGGCGGCATG ACCGGCACCG GCAAGACCGA GGTGCTCGCC
CAGCTGCACA ACGCCGTGGA TCTGGAGGCG CATGCCAACC ATCGCGGCTC CAGCTTCGGC
AAGCGCGCCA GCGGGCAGCC GGCGCAGATC GATTTCGAGA ATGCCCTGGC CATCGACCTG
CTCAAGCGCC GTGCCGCCGG GCAGCGACAG TTCGTTCTGG AGGACGAGGC GCGTCTGATC
GGTCGTTGCT CCTTGCCGCT GCCGCTCTAT CAGGGCATGC AGCACTATCC GCTGGTCTGG
CTGGAGGACA GCCTGGGCGA TCGCGTCGAG CGCATCCTGC AGGCCTACGT GGTCGAGCTG
TGCGCCGAGT TCGTCGCGGT GGAGGGGGCA GAGGCCGGTT TCGCCGCCTT CGCCGCACGC
CTGCGCGAAA GTCTGGCCAA TATCACCCGG CGTCTTGGCG GCGAGCGTTA TCAGCGGCTG
GCGGCGATCA TGGATCAGGC GCTGGAGGAG CAGGCGCGCG ACGGCCAGGT CGATACCCAT
CGCGGCTGGA TCGAAGCCCT GCTGGTGGAG TACTACGATC CCATGTACGT ATTCCAGCGC
GAGAGCAAGG CCGGACGCAT CGAGTTCGCC GGCGAGCAGC AGGCGGTGGT GGAGTACTTG
CGCCAGCGAA GCGGGCACTT TCCCGAGGCA CCGGCGTCCT AA
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| Protein sequence | MRENCTDYRD LFINDRPMMD ARAPVEFHKG AFPGVINLPL MNDIERQKVG TCYKQHGQQA
AIELGHQLVS GRTKAERIEA WASFAKANPD GYLYCFRGGL RSQIVQQWLK SEAGIDYPRV
IGGYKAMRGF LLETTEQAVA ECDFVLVGGM TGTGKTEVLA QLHNAVDLEA HANHRGSSFG
KRASGQPAQI DFENALAIDL LKRRAAGQRQ FVLEDEARLI GRCSLPLPLY QGMQHYPLVW
LEDSLGDRVE RILQAYVVEL CAEFVAVEGA EAGFAAFAAR LRESLANITR RLGGERYQRL
AAIMDQALEE QARDGQVDTH RGWIEALLVE YYDPMYVFQR ESKAGRIEFA GEQQAVVEYL
RQRSGHFPEA PAS
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