| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2440 |
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| Symbol | |
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| ID | 5107316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2703958 |
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| End bp | 2704893 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503684 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187928 |
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| Protein GI | 146307463 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.554767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA CCAAGGTGGA TCTCAACCTC TTCATCGTCT TCGACGCCAT CTACACCGAG
GCCAATCTGA CCCGTGCCGG ACAGATCGTC GGCATCACCC AGCCGGCGGT TTCCAATGCC
CTGGCCCGCC TGCGCGAGAC CTTCAACGAC CCGCTGTTCG TACGCACCGC CCAGGGCATG
GTGCCGACGC CGATGGCGCA GAACATCATC GGCCCGGTGC GCAATGCCCT GCAGCTGCTG
CGCGTGTCGG TGCAGGAAAG CCGCACCTTC AATCCACTGC AGGCGAACAA GACCTATCGC
ATCAGCATGA CCGACCTCTC CGAGCAGATC CTCCTGCCGC CGCTGTTCCA GCGTCTGCGC
CGCCTGGCGC CGAGCGTGTG CATCGAGAGT TTCCTGGCCA AGCGCCGCGA GACCACCAAG
GAGCTGGCCG CCGGCCGCCT CGACTTCGCC GTCGACGCAC CGCTCAACAC CGACCCGCAG
GTGCGTCACG TCAAGCTGCT GGATGACCGC TACGTCTGCG CCATGCGCCC GGGCCACCCG
CTGGCCAAGG ACAAGATCAG CCTCGACGAG TACCTGTCGC TGACGCACAT CCACATCTCC
AGCCGCCGCA GCGGGCTGGG CTACGTGGAT CTGGCCCTGG GCAAGATGGG CATACAGCGC
AAGATCGCCC TGCGCTCGCA GCATTACCTG ATGGCCAGCA GCGTGATGCT GCAGACCGAT
ATGGTGATCA CCGTGCCGGA GCGCTTCGCC CGCCGTCATC ACCTGCATCA CGTGACGCTG
CCGGTCGGCG ACGTGCCGGC GCTGGAAACC CACCTGTACT GGCACGAAAG CACCGATCAG
GACCCGGCCA ACCGCTGGAT GCGCGAGCAG ATGATCGAAC TGGCCCAGCA GGTCACCGCG
CAGGAGAAGA AAGCCGAGCA GGCCGCGACG ACCTGA
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| Protein sequence | MNLTKVDLNL FIVFDAIYTE ANLTRAGQIV GITQPAVSNA LARLRETFND PLFVRTAQGM
VPTPMAQNII GPVRNALQLL RVSVQESRTF NPLQANKTYR ISMTDLSEQI LLPPLFQRLR
RLAPSVCIES FLAKRRETTK ELAAGRLDFA VDAPLNTDPQ VRHVKLLDDR YVCAMRPGHP
LAKDKISLDE YLSLTHIHIS SRRSGLGYVD LALGKMGIQR KIALRSQHYL MASSVMLQTD
MVITVPERFA RRHHLHHVTL PVGDVPALET HLYWHESTDQ DPANRWMREQ MIELAQQVTA
QEKKAEQAAT T
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