Gene Pmen_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2438 
Symbol 
ID5107314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2701271 
End bp2702260 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID640503682 
Productintegral membrane protein TerC 
Protein accessionYP_001187926 
Protein GI146307461 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.622946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTC TACTTGCCTT TTTCACCACC CCGCTCTTCG GTACCCCCGG CTGGTTCTGG 
CTGGCCTTTC TGATACTCAT CGTCACCCTT CTGGTACTCG ACCTCGGCGT GCTGCATCGC
GATCAGCACG AAATCGAGAT GCGCGAGAGC CTGCTGCTGT ACTCGGGCTA CTTCAGCGTC
GGTGTCGCCT TCGGCGGCTG GATCTGGTGG CAACTGGGCG CGACCAAGGC GCTGGAGTAC
TACACCGGCT TTCTCGTCGA GCAGTCGTTG TCGATGGACA ACGTCTTCGT CATGGCGATG
ATCCTCGGCT ACTTCAACAT CCCCCGGCGC TATCAGCACC GCGTGCTGTT CTGGGGCATC
CTCGGGGTCA TCGTGCTGCG CGCCATCATG ATCGGCCTGG GTACGGCCCT GGTGCAGCAG
TTCGACTGGA TTCTCTACCT CTTCGGCGCC TTCCTTCTGC TGAGTGGCTT CAAGATGCTG
CGCAGCAATG ACCATGAAGC GCATCCCGAC CTTGCGCAGA ACCCGCTGCT GCGCTTCGTG
CGCAAGCACA TCCGCGTGAC CGACGAGCTG CATGGTGGCC AGTTCCTGGT GCGCCTGCAG
GATCAGGTCA GCGGCAAACC GCTGCTGTAT GCCACGCCAC TGCTGCTGGC GCTGATCCTG
ATCGAGCTGG CCGACCTGGT CTTCGCCGTG GACAGCGTAC CGGCCGTGCT GGCCATCTCG
CAGGACCCGT TCATCGTCTA CACCTCAAAC ATCTTCGCCA TCCTCGGCCT GCGCGCGCTG
TACTTCGCCC TGGCCGCGCT GATGCACCGC TTCATCTACC TGAAGTACGC GCTGGCGCTG
GTGCTGATGT ACATCGGCGG CAAGATCTTC CTGCACGATC TGGTCAAGGT TCCCGCCCTG
CTCTCGCTTG GCGTAACCTT GGGCCTGCTG GCTGGCGGCG TGGTGCTTTC CCTGCTGCGC
ACCCGCGAGC CGAGGGCTGC CGAACACTGA
 
Protein sequence
MDALLAFFTT PLFGTPGWFW LAFLILIVTL LVLDLGVLHR DQHEIEMRES LLLYSGYFSV 
GVAFGGWIWW QLGATKALEY YTGFLVEQSL SMDNVFVMAM ILGYFNIPRR YQHRVLFWGI
LGVIVLRAIM IGLGTALVQQ FDWILYLFGA FLLLSGFKML RSNDHEAHPD LAQNPLLRFV
RKHIRVTDEL HGGQFLVRLQ DQVSGKPLLY ATPLLLALIL IELADLVFAV DSVPAVLAIS
QDPFIVYTSN IFAILGLRAL YFALAALMHR FIYLKYALAL VLMYIGGKIF LHDLVKVPAL
LSLGVTLGLL AGGVVLSLLR TREPRAAEH