| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2430 |
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| Symbol | |
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| ID | 5108270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2686426 |
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| End bp | 2689518 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503674 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001187918 |
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| Protein GI | 146307453 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.157087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.957896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCT CCCGCCCCTT CATCCTGCGG CCGGTCGCCA CCACGCTGCT GATGGTGGCG
ATCTTCTTGA GCGGCCTGAT CGCCTACCGC CTGTTGCCGG TCTCGGCATT GCCGGAGGTG
GATTACCCAA CCATCCGCGT ACTGACCCTG TACCCGGGCG CCAGCCCGGA CGTGATGACC
AGTGCGGTGA CCGCGCCGCT GGAGCGCCAG TTCGGGCAGA TGGCCGGGCT CAAGCAGATG
TCCTCGACCA GCTCCGGCGG CGCCTCGGTG ATCACCCTGC GCTTCAATCT GGAGGTGCCG
CTGGCGGTGG CCGAGCAGGA GGTGCAGGCG GCGATCAATG CGGCGAGCAA CCTGCTGCCG
GGCGATCTGC CGGCGCCGCC GGTGTACAAC AAGGTCAACC CGGCCGATAC GCCGGTGCTG
ACCCTGGCGG TGACGTCCAG CGCCATGCCG CTGCCGCAGG TCAACGACCT GGTGGACACT
CGCCTGGCGC AGAAACTGGC GCAGACCAGC GGTGTCGGTC TGGTCACTCT GGCCGGCGGT
CAGCGCCCGG CAGTGCGCAT CCGCGTCAAC CCCGAGGCTT TGGCCTCCTA CGGTCTGAGC
CTGGCCGACG TGCGCAGCCT GATCACCGCC AGCAACGTCA ATCAGCCCAA GGGCAATTTC
GACGGCCCGA CCCGGGTCTC GCAGCTCGAT GCCAATGACC AGCTGAAAAC CGTGGACGAG
TACCGCGAGC TGATCCTCAG CTACCAGAAC GGCGCCGCGC TGCGCCTGAA GGATGTCGCC
GAGATCATCG ACGGCGCCGA GAACGAGCGC CTGGCCGCCT GGGCCGATCG CAACCAGGCG
GTGCTGGTCA ACGTGCAGCG CCAGCCCGGG GCCAACGTCA TCGAGGTGGT CGACCGCATC
CAGACCCTGC TGCCGCACCT GACCGAAGGC CTGCCGGCCA GCGTCGAGGT CAAGGTGCTC
ACCGACCGCA CCCAGACCAT CCGCGCCGCA GTGCGCGACG TGCAGCACGA GCTGCTGCTG
GCCATCGCCC TGGTGGTGAT GGTGACCTTC CTGTTCCTGC GCAAGCTGTC GGCGACCATC
ATCCCGTCGA TCGTCGTGCC GCTGTCGCTG ATCGGCACCT TCGGCGTGAT GTACCTGGCC
GGCTTCACCA TCAACAACCT GACGCTGATG GCACTGACCA TCGCCACTGG TTTCGTGGTG
GACGATGCCA TCGTCATGCT GGAGAACATC GCCCGCCATC TGGAGGAGGG CGAGACGCCG
CTGGAGGCCG CGCTCAAGGG CGCGCGGCAG ATCGGCTTCA CCCTGGTCTC GCTGACCCTG
TCGCTGATCG CCGTGCTGAT TCCGCTGCTG TTCATGGCCG ATGTGGTCGG GCGGCTGTTC
CGCGAGTTCG CCATCACCCT GGCGGTGGCC ATCCTGATTT CCCTGGTGGT GTCGCTGACC
CTGACGCCGA TGATGTGCGC GCGCCTGCTC AAGGCGGAAA AGCCCGAAGA GGAGGGGCGC
TTCTACCGCG CCGCCGGAGG CTTCATCGAC GCCATGATCG AGCGCTACGG CGTGTGGCTG
CAGTGGGTGC TCAGGCACCA GCCGCTGACC CTGCTGGTGG CCGTGGCCAC CCTGGGCCTG
ACCGTGCTGT TGTACCTGGC GGTGCCCAAG GGCTTCTTCC CGGTACAGGA CACCGGGGTG
ATCCAGGGCA TTTCCGAGGC GCCGCAGTCG ATTTCCTTCA GCGCCATGAG CGAGCGTCAG
CAGCGTCTGG CCGACGTCAT CCTGCGCGAT CCGGCGGTGG CCAGTCTGTC CTCGTCCATC
GGCGTGGACG GCGACAACCC CACGCTCAAC AGCGGCCGCC TGCTGATCAA CCTCAAACCC
CATGGCGAGC GCGACGTCAC CGCCAGCCAG GTGATCGAAC GGCTGCGTCC CGAGCTGGCG
AAGATTCCCG GGATCGAGCT GTTCATGCAG CCGGTGCAGG ATCTGACCAT CGAGGATCGC
ATCAGCCGCA CCCAGTTCCA GTTCACCCTG GAATCGCCCG ACAGCCAGCT GCTGGAAACC
TGGACGCCGC GCCTGGTCGA GGCGCTGCGC GAGCAGCCGC AGCTCACCGA TGTCGCCAGC
GATCTGCAGA ACCGCGGCTT GCAGGTGTAC CTGGATATCG ACCGCGACGC CGCCGCGCGT
CTGGGCATCA ATGTCGGCGA TATCGACGAT GCGCTCTACG ACGCCTTCGG CCAGCGCCAG
ATCAGCACCA TCTATACCCA GTCCAGCCAG TACCGGGTGG TGCTGGAGAG CCGCGACGGC
GGCCGCATCG GTCTGGCCGC GCTGCGTCAG ATCCACGTCG CCACCGGCGA TGGCCAGCAG
GTACCGCTGT CCTCCCTGGC ACGGATCGAA GAGCGCCCGG CCAGCCTGCT GGTCAACCAT
ATCGGCCAGT TCCCGGCGGT GACCCTGTCG TTCAACCTGG CGCCGGGCGT GTCGCTGGGC
GAGGCGGTGG CAGTGATCGA GCAGGTGGAG CGGGAGATCG GCCTGCCCGG CGCGATCAAC
ACCCAGTTCC AGGGCGCGGC CGAGGCCTTC CGCGCCTCGC TGAGCTCCAC GCTGCTGCTG
ATCCTGGCGG CCATCATCAC CATGTACATC GTGCTCGGCG TGCTCTACGA GAGCTATATC
CACCCGATCA CCATTCTCTC GACCCTGCCC TCGGCCGGTG TCGGCGCCTT GCTGGCGCTG
CTGCTGACCG GCAACGACCT GGGCCTGATC GCCATCATCG GCATCATCCT GCTGATCGGC
ATCGTCAAGA AGAACGCGAT CATGATGATC GACTTCGCCC TGGAGGCCGA ACGCAACCAG
GGCATGGCGC CCGAGGCGGC GATCTACCAG GCGGCGCTGC TGCGTTTCCG TCCGATCTTG
ATGACCACCC TGGCCGCGCT GTTCGGCGCC ATCCCGCTGA TGCTGGCCTC GGGCTCCGGC
GCCGAGCTGC GCCAGCCGCT GGGCCTGGTG ATGGTGGGCG GCCTGCTGGT CAGCCAGGTG
CTGACGCTGT TCACCACACC GGTGATCTAT CTGTACTTCG ATCGTCTGTC GCGCCGCGTC
AGCGGGCGCA GTGCGGCGGG GGTGGCGATA TGA
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| Protein sequence | MNISRPFILR PVATTLLMVA IFLSGLIAYR LLPVSALPEV DYPTIRVLTL YPGASPDVMT
SAVTAPLERQ FGQMAGLKQM SSTSSGGASV ITLRFNLEVP LAVAEQEVQA AINAASNLLP
GDLPAPPVYN KVNPADTPVL TLAVTSSAMP LPQVNDLVDT RLAQKLAQTS GVGLVTLAGG
QRPAVRIRVN PEALASYGLS LADVRSLITA SNVNQPKGNF DGPTRVSQLD ANDQLKTVDE
YRELILSYQN GAALRLKDVA EIIDGAENER LAAWADRNQA VLVNVQRQPG ANVIEVVDRI
QTLLPHLTEG LPASVEVKVL TDRTQTIRAA VRDVQHELLL AIALVVMVTF LFLRKLSATI
IPSIVVPLSL IGTFGVMYLA GFTINNLTLM ALTIATGFVV DDAIVMLENI ARHLEEGETP
LEAALKGARQ IGFTLVSLTL SLIAVLIPLL FMADVVGRLF REFAITLAVA ILISLVVSLT
LTPMMCARLL KAEKPEEEGR FYRAAGGFID AMIERYGVWL QWVLRHQPLT LLVAVATLGL
TVLLYLAVPK GFFPVQDTGV IQGISEAPQS ISFSAMSERQ QRLADVILRD PAVASLSSSI
GVDGDNPTLN SGRLLINLKP HGERDVTASQ VIERLRPELA KIPGIELFMQ PVQDLTIEDR
ISRTQFQFTL ESPDSQLLET WTPRLVEALR EQPQLTDVAS DLQNRGLQVY LDIDRDAAAR
LGINVGDIDD ALYDAFGQRQ ISTIYTQSSQ YRVVLESRDG GRIGLAALRQ IHVATGDGQQ
VPLSSLARIE ERPASLLVNH IGQFPAVTLS FNLAPGVSLG EAVAVIEQVE REIGLPGAIN
TQFQGAAEAF RASLSSTLLL ILAAIITMYI VLGVLYESYI HPITILSTLP SAGVGALLAL
LLTGNDLGLI AIIGIILLIG IVKKNAIMMI DFALEAERNQ GMAPEAAIYQ AALLRFRPIL
MTTLAALFGA IPLMLASGSG AELRQPLGLV MVGGLLVSQV LTLFTTPVIY LYFDRLSRRV
SGRSAAGVAI
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