| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2429 |
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| Symbol | |
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| ID | 5108269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2683200 |
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| End bp | 2686304 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503673 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001187917 |
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| Protein GI | 146307452 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.618846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CCGCCCCCTT TATCCGCCGT CCGGTGGCGA CCCTGCTGCT GAGCCTGGCG
ATCATGCTGC TCGGCGGCGT CAGCTTCGGC CTGTTGCCGG TGGCGCCGTT GCCGCAGATG
GATTTTCCCA CCATCACCGT GCAGGCCAGC CTGCCGGGGG CCAGCCCGCA GATCATGGCG
GCCACCGTGG CCACGCCGCT GGAGCGTTCG CTCGGCACCA TCGCCGGCAT CAGCCAGATG
AACAGCCGCA GCAGCCAGGG CAGCACGCGG ATCATGATCC AGTTCGACCT GGACAAGGAC
ATTAACACCG CCGCGCGCGA GGTGCAGGCG GCGATCAACG CCGCCCGCGA GCTGCTGCCC
AGCGGCATGC GCACGATGCC CAGCTACCGC AAGATCAATC CGTCGCAGGC GCCGATCATG
GTCATCTCGC TGACCAGCGA CACCCTGAGC AAGGGCCAGC TGTACGACGT GGCCTCGACC
ATCCTGGCGC AGAAGCTGGC GCAGGTCGGC GGCGTCGGCG AGGTGCAGGT CGGCGGCAGC
TCCCTGCCGG CTGTACGCGT GTCGCTGGAG CCGCGCCTGC TCGACCAGTA CGGCATCGCC
CTGGACGAAG TGCGCCAGAC CATCGCCGCG AGCAACGCCC TGCGGCCCAA GGGCGCGGTG
GAGGACGAGC AGCGCCGCTG GCAGGTGCAG GCCAGCGACC AGCTGGCCAA GGCCGCCGAC
TACCTGCCGA TGATCATCCG CTACCAGGAC GGCGCCGCGG TGCGCCTGGG CGACGTGGCC
ACCGTCACCG ACGGCGTCGA GGACCGCTAC AACAGCGGCT TCTTCAACGA TCGCGAGGCC
GTGCTGCTGG TGATCAATCG GCAGAGCGGG GCGAACATCC TGCAGACCAT CGCCGACATA
CGTGCCGAGC TGCCGGCGCT GCGCGAGGTG ATCCCGGCCA GCGTCGACCT GGAAGTGGCC
ATGGACCGTT CGCCGGTGAT CCGCGCCACC CTGCACGAAG CCGAGCGCAC CCTGCTGATC
GCCGTGGGCC TGGTGATCCT GGTGGTGCTG GCCTTCCTCG GGCGCTGGCG CGCGGCGCTG
ATTCCGGCGC TGGCGGTGCC GGTGTCGCTG ATCGGCAGTT TCGCCGCCAT GTACCTGCTG
GGATTCTCGC TGAACAACCT GTCGCTGATG GCGCTGATCA TCGCCACCGG CCTGGTGGTG
GACGACGCCA TCGTGGTGCT GGAGAACATC GCCCGCCACA TCCACAACGG CGAGAAGCCC
ATGGCGGCCG CCTTCAAGGG CTCGCGCGAA GTGGGCTTCA CCCTGCTGTC GATGAACCTG
TCGCTGGTCG CGGTGTTCAT CTCCATCCTG TTCATGGGCG GCATCGTCGA GCGGCTGTTT
CGCGAGTTCT CCATCACCCT GGCGGTGGCC GTGGTGATCT CCCTGGTGGT GTCGCTGACC
TTGACGCCGA TGCTCTGCGC ACGCTGGCTC AAGGCCGAGA CCGAGCAGCC TCAGGGCCGC
CTGCAGCAGT GGGGCGAGCG CCTGCAGAAC CGCGTGCTGG CCTTCTACGG GCGCAGCCTG
GACTGGGCGT TGCGTCACTC GCTGCTGATG CTGCTGAGCC TGCTGGCGAC CATTGCGCTG
AACGTCTACC TGTTCGTCAG CATTCCCAAG ACCTTCATGC CGCAGCAGGA TACCGGCCAG
CTGATCGGCT TCATTCGCGG CGACAACGGC CTGTCGTTCC AGGTCATGCA GCCGAAGATG
GTGATCTTCC GCAAGGCGGT GCTGGCCGAT CCGGCAGTGG ACAGCGTGGC CGGATTCATC
GGTGGCGCCG GCGGCATCAA CAACGCCTTC ATGATCGTGC GTCTGAAACC GATCAGCGAG
CGCAACGTTT CCTCGCAGCA GGTGATCAAT CGCCTGCGCG CCAGCGTGCC GAAGGTGCCG
GGCGGGCGCA TGTTCCTCAT GCCGGATCAG GATCTGCAGA TCGGCGGCCG CGAGGGGCGC
AGCTCGGAGA ACGAGTACAT GCTGCTCTCC GACGACCTCG ACGCCCTGCG CCAGTGGCTG
CCGAAAGTGC GCGAAGCCCT GCGCGCCTTG CCCGAGCTGA CTGATATCGA CGCCCGCGAG
AACAGCGGTG CGCAGCAGAT CCGCCTGGTG GTGGACCGCG AGGCCGCGCA GCGCCTGGGC
GTGGAGATGA GCATGATCAC CGCGGTGCTC AACAACGCCT TCAGTCAGCG CCAGGTGTCG
ACCATCTACC AGGCCCTGAA CCAGTACAGC GTGGTGATGG AAATCAACCC GCGCTATGCC
CAGCACCCCG AGGCGCTGGA TCAGATCCAG CTGATCACCG CCGATGGGGC GCGCGTGCCG
CTGTCCACCT TCGCCCGCTG GGAGCGCGGC CTGGAGGAGG ACCGGGTCAA CCACCAGGGT
CAGTTCGCCG CCGAGAACAT CGGCTTCGCC CTGGCCGAGG GCGTCAGCCT GGATCAGGCC
AGTAGGGCGA TAGAGGATGC GGTGGCGCGC CTCGGTCTGC CCACCGAGGT GCAGGGCACC
CTGGGCGGTA CCGGCGCGGC CTTCCAGCAG ACCCAGGGCA ACCAGCCGCT GATGATCCTG
CTGGCGCTGG TGGTGGTGTA CATCGTGCTC GGCGTGCTCT ACGAGAGCTA CGTGCATCCG
CTGACCATCC TCTCCACGCT GCCCTCGGCC GGCGTCGGCG CCTTGCTCGC GCTGCAGCTG
GTGGGCATGG AGTTCAGCCT GATTTCGCTC CTGGGCCTGT TTCTGCTGAT CGGCATCGTC
AAGAAGAACG CCATCCTCAT GGTCGACCTG GCGCTGCAAC TGGAACGTAG CGAGCATCTG
AGCCCGCAGG AATCCATCCG CCGCGCCTGC CTGCTGCGCT TTCGGCCGAT CCTGATGACC
ACCCTGGCGG CCATTCTCGG CGCGCTGCCG CTGGTGCTGG GCAGTGCCGA AGGCTCGGAA
ATGCGCCAGC CGCTGGGCAT CACCATCGTC GGTGGCCTGG TACTCAGCCA GTTGCTGACG
CTCTACACCA CGCCGGTGAT CTACCTCTAC TTCGACCGCC TGCGCCACCG CGTCAACCGC
TGGCGCGGCG TGCGCACCGA TGCTTCGTTG GAAACTCCGC TATGA
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| Protein sequence | MNLSAPFIRR PVATLLLSLA IMLLGGVSFG LLPVAPLPQM DFPTITVQAS LPGASPQIMA
ATVATPLERS LGTIAGISQM NSRSSQGSTR IMIQFDLDKD INTAAREVQA AINAARELLP
SGMRTMPSYR KINPSQAPIM VISLTSDTLS KGQLYDVAST ILAQKLAQVG GVGEVQVGGS
SLPAVRVSLE PRLLDQYGIA LDEVRQTIAA SNALRPKGAV EDEQRRWQVQ ASDQLAKAAD
YLPMIIRYQD GAAVRLGDVA TVTDGVEDRY NSGFFNDREA VLLVINRQSG ANILQTIADI
RAELPALREV IPASVDLEVA MDRSPVIRAT LHEAERTLLI AVGLVILVVL AFLGRWRAAL
IPALAVPVSL IGSFAAMYLL GFSLNNLSLM ALIIATGLVV DDAIVVLENI ARHIHNGEKP
MAAAFKGSRE VGFTLLSMNL SLVAVFISIL FMGGIVERLF REFSITLAVA VVISLVVSLT
LTPMLCARWL KAETEQPQGR LQQWGERLQN RVLAFYGRSL DWALRHSLLM LLSLLATIAL
NVYLFVSIPK TFMPQQDTGQ LIGFIRGDNG LSFQVMQPKM VIFRKAVLAD PAVDSVAGFI
GGAGGINNAF MIVRLKPISE RNVSSQQVIN RLRASVPKVP GGRMFLMPDQ DLQIGGREGR
SSENEYMLLS DDLDALRQWL PKVREALRAL PELTDIDARE NSGAQQIRLV VDREAAQRLG
VEMSMITAVL NNAFSQRQVS TIYQALNQYS VVMEINPRYA QHPEALDQIQ LITADGARVP
LSTFARWERG LEEDRVNHQG QFAAENIGFA LAEGVSLDQA SRAIEDAVAR LGLPTEVQGT
LGGTGAAFQQ TQGNQPLMIL LALVVVYIVL GVLYESYVHP LTILSTLPSA GVGALLALQL
VGMEFSLISL LGLFLLIGIV KKNAILMVDL ALQLERSEHL SPQESIRRAC LLRFRPILMT
TLAAILGALP LVLGSAEGSE MRQPLGITIV GGLVLSQLLT LYTTPVIYLY FDRLRHRVNR
WRGVRTDASL ETPL
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