| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2423 |
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| Symbol | |
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| ID | 5108263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2674256 |
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| End bp | 2675785 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503667 |
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| Product | NADH dehydrogenase subunit M |
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| Protein accession | YP_001187911 |
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| Protein GI | 146307446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.200315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCC CCTGGCTAAT CCTGATCCCC TTCATCGGCG GTCTGCTGTG CTGGCAAGGC
GAGCGTTTCG GCCACGTCCT GCCGCGCTGG CTCGCGCTGA TCACCATGGG CCTGCTGCTC
GGCCTCGGCC TGTGGCTGTG GGCCAGCGGC GACTTCACCC TGGCGCCGGC GCCGGACGGC
GGCCCGCGCT GGGCCCACGA GTTCGTCATC GACTGGATTC CGCGCCTGGG CATCACCATC
CATCTGGCCA TGGACGGCCT GTCGGTGCTG ATGGTGGTGC TCACCGGCCT GCTCGGCGTG
CTCTCGGTGC TGTGCTCGTG GAACGAGATC CAGCACCGCG TCGGCTTCTT CCACCTCAAC
CTGATGTGGA TTCTTGGCGG CGTGGTCGGC GTGTTCCTCG CCGTCGACCT GTTCCTGTTC
TTCTTCTTCT GGGAAATGAT GCTGGTGCCG ATGTACTTCC TCATCGCGCT CTGGGGTCAT
AGCGGCAGCG ACGGGCGCAC CCGCATCACC GCCGCCACCA AGTTCTTCAT CTTCACCCAG
GCCAGCGGCC TGATCATGCT GGTGGCGATC CTCGCCCTGG TGCTCGTGCA CTTCAACCAG
ACCGGGGTGC TGACCTTCAA CTACGCCGAC CTGCTGCAGA CCGAGCTGGC GCCGGGCACC
GAATACCTGC TGATGCTCGG CTTCTTCATC GCCTTCGCGG TGAAGTTCCC GGTGGTGCCG
GTGCACTCCT GGCTGCCGGA CGCCCACGCC CAGGCGCCCA CCGCGGGCTC GGTGGACTTG
GCCGGCATCC TGCTGAAGAC CGCCGCCTAC GGCCTGCTGC GTTTCGCCCT GCCGCTGTTC
CCCAACGCCT CGGCGGAGTT CGCGCCCATC GCCCAGTGGC TGGGCGTGTT CGCCATCATC
TATGGCGCCT TATTGTCCTT CGCGCAGACC GACATCAAGC GCCTGGTGGC CTACTCCAGC
GTGTCGCACA TGGGCTTCGT GCTGATCGCC ATCTACTCCG GCAGCCAGAT CGCCCTGCAG
GGTGCGGTGG TGCAGATGGT CGCCCACGGC CTGTCCGCCG CAGCGCTGTT CATCCTCTGC
GGCCAGCTCT ACGAGCGCCT GCACACCCGT GATCTGCGCC AGATGGGCGG GATCTGGGCG
CGCATGCCGT GGCTGCCGGC CATCAGCCTG TTCTTCGCCG CCGCCGCGCT GGGCCTGCCG
GGCACCGGCA ACTTCGTCGG CGAGTTCCTC ATCCTGATCG GCAGCTTCCC CGGTGCCCCA
TGGGTCGTGG TGATCGCCGC CACCGGCCTG GTGCTGGGCT CGGTGTACGC CCTGGCGATG
ATCCACCGCG CCTATTTCGG CCCGGTGCAG CAGGATGCGC CGCTGCCCGG GCTCAAGCCG
CGCGAGCTGA GCATGGTGCT CGGCCTCGCG GTCCTGCTGA TCCTGCTTGG CGTCTACCCG
CAGCCGGTGC TCGACACCTC AGCCGCCAGC ATGCATGGCG TGCAGCAGTG GATGGCAGAC
GCTCTCAATC AACTCGCTTC GGCCCGCTAG
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| Protein sequence | MILPWLILIP FIGGLLCWQG ERFGHVLPRW LALITMGLLL GLGLWLWASG DFTLAPAPDG
GPRWAHEFVI DWIPRLGITI HLAMDGLSVL MVVLTGLLGV LSVLCSWNEI QHRVGFFHLN
LMWILGGVVG VFLAVDLFLF FFFWEMMLVP MYFLIALWGH SGSDGRTRIT AATKFFIFTQ
ASGLIMLVAI LALVLVHFNQ TGVLTFNYAD LLQTELAPGT EYLLMLGFFI AFAVKFPVVP
VHSWLPDAHA QAPTAGSVDL AGILLKTAAY GLLRFALPLF PNASAEFAPI AQWLGVFAII
YGALLSFAQT DIKRLVAYSS VSHMGFVLIA IYSGSQIALQ GAVVQMVAHG LSAAALFILC
GQLYERLHTR DLRQMGGIWA RMPWLPAISL FFAAAALGLP GTGNFVGEFL ILIGSFPGAP
WVVVIAATGL VLGSVYALAM IHRAYFGPVQ QDAPLPGLKP RELSMVLGLA VLLILLGVYP
QPVLDTSAAS MHGVQQWMAD ALNQLASAR
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