| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2420 |
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| Symbol | |
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| ID | 5108260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2671581 |
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| End bp | 2672090 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503664 |
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| Product | NADH dehydrogenase subunit J |
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| Protein accession | YP_001187908 |
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| Protein GI | 146307443 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.146876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCG CGTTCTACTT CGCCGCCGGC GTGGCGGTGG CAGCCACGGT GGGGGTGGTC
ACCAACACCA ATCCGGTGCA TGCCCTGCTG TATCTGATCG TCTCGCTGCT GGCAGTGTCG
ATGGTGTTCT TCGCCCTTGG TGCGCCCTTC GCCGGCGCAC TGGAAATCAT CGTCTACGCC
GGCGCCATCA TGGTGCTGTT CGTCTTCGTG GTGATGATGC TCAACCTCGG CCCGGCCGCC
GTGGATCAGG AGCGCAAGTG GCTTGCTCCC GGCATCTGGA TCGGCCCGGC GCTGCTCAGC
GCCCTGCTGC TGGGGCAGCT GCTCTACGTG CTGCTGGCAC AACCCGGCGA TGCGACCATC
GGCCATGCCA GCGTCGAAGC CAAGGCGGTC GGCATCAGCC TGTTCGGCCC CTACCTGCTG
GCGGTGGAGC TGGCCGCCAT GCTGCTGCTC GCCGCGCTGG TCGCCGCCTT CCATCTCGGC
CGTCACGATG CCAAGGAGCC CAACGCATGA
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| Protein sequence | MEFAFYFAAG VAVAATVGVV TNTNPVHALL YLIVSLLAVS MVFFALGAPF AGALEIIVYA
GAIMVLFVFV VMMLNLGPAA VDQERKWLAP GIWIGPALLS ALLLGQLLYV LLAQPGDATI
GHASVEAKAV GISLFGPYLL AVELAAMLLL AALVAAFHLG RHDAKEPNA
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