| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2413 |
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| Symbol | |
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| ID | 5108253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2662817 |
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| End bp | 2663494 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503657 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_001187901 |
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| Protein GI | 146307436 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.119197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0839768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATACA AACTTACTCG GGTCGACCCG AATGCGCCCA ACGAGGCGTA TCCGATCGGC
CAGCGGGAGC TCGTGTCCGA CCCGTTGCTA GAGGATCAGG TCCACAAGAA CATCTACATG
GGCAAGCTGG AAGAGGTGCT CAACGGCGCC ATCAACTGGG GACGCAAGAA CTCCCTGTGG
CCCTACAACT TCGGCCTCTC CTGCTGCTAC GTGGAAATGA CCACGGCCTT CACCGCCCCG
CACGACGTCG CGCGTTTCGG CGCCGAGGTC ATCCGCGCCT CACCCCGCCA GGCCGATTTC
ATGGTCATCG CCGGCACCTG CTTCATCAAG ATGGCGCCGG TCATCCAGCG TCTCTACGAG
CAGATGCTGG AGCCCAAGTG GGTCATTTCC ATGGGTTCAT GCGCCAACTC CGGCGGCATG
TACGACATCT ACTCGGTCGT TCAGGGGGTG GACAAGTTCC TTCCCGTGGA CGTCTACATC
CCCGGCTGTC CGCCCCGCCC CGAGGCATTC CTGCAAGGCC TGATGCTGCT GCAGGAGTCC
ATCGGCCAGG AGCGTCGCCC GCTATCCTGG GTGGTAGGAG ACCAGGGCAT CTACCGTGCC
GAGATGCCTT CGCAGAAGGA GCAACGCCGC GAGCAGCGAA TCGCCGTTAC CAATCTACGT
AGCCCCGACG AAGTCTGA
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| Protein sequence | MQYKLTRVDP NAPNEAYPIG QRELVSDPLL EDQVHKNIYM GKLEEVLNGA INWGRKNSLW
PYNFGLSCCY VEMTTAFTAP HDVARFGAEV IRASPRQADF MVIAGTCFIK MAPVIQRLYE
QMLEPKWVIS MGSCANSGGM YDIYSVVQGV DKFLPVDVYI PGCPPRPEAF LQGLMLLQES
IGQERRPLSW VVGDQGIYRA EMPSQKEQRR EQRIAVTNLR SPDEV
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