Gene Pmen_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2405 
Symbol 
ID5108245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2653226 
End bp2653867 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID640503649 
Producthypothetical protein 
Protein accessionYP_001187893 
Protein GI146307428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0984666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA GAGACGCCCC GGTCGAACCG ATCGATACGC CAGAAGCCAT CGAGCTGGCA 
GCCATCGAGT TCGAGTCGCC GGGGCGTTTT GCCGTGCACA ACCCGCAGTC CGTGACGCCG
GATGCGGCGC AATGGGAGCC GGCGCCCTTC ATCCTCGGTC AGCACGAGCA TCTGGAACGC
TTCAGCCAGC CGCAGGAGGC GCGCGCTCAC GTGCTGGCAC TGATCCAGCA GGCCCAGCGC
AGCCTGTGCC TGTACAGCGA CGACCTGGAG CCCTGGCTCT ATCACCACAG CAGTGTGCAG
CAGGCCTGCA CCCGCTTTCT GCTGAGCAGC CCGCGGGCGC GCCTGCGCAT CCTGCTGCGC
GATCCGACCC GTGCCGTGAA GGAAGGCCAT CGTCTGCTCA GCCTGTCTCG CCGCTTGTCG
TCGAATCTGC ATATCCGCAA ACTCAACCCG GACCATGCCA GCGAGGAGCT GGCCTACCTG
ATTGCCGACG ACCGAGGGCT GCTGTTACGC CCGGAGCTCG ACCAGCAGTC CGGCTATACC
CTGTACAACG ACCCGGCGCG CGTTCGTCAG CGCCAGGCCC AGTTCGACCA GGCCTGGGAC
ACCAGCATCA CCGACCCCGA TCTGCGGAGC TTTCTGCTAT GA
 
Protein sequence
MNERDAPVEP IDTPEAIELA AIEFESPGRF AVHNPQSVTP DAAQWEPAPF ILGQHEHLER 
FSQPQEARAH VLALIQQAQR SLCLYSDDLE PWLYHHSSVQ QACTRFLLSS PRARLRILLR
DPTRAVKEGH RLLSLSRRLS SNLHIRKLNP DHASEELAYL IADDRGLLLR PELDQQSGYT
LYNDPARVRQ RQAQFDQAWD TSITDPDLRS FLL