Gene Pmen_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2404 
Symbol 
ID5108244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2652792 
End bp2653217 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID640503648 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001187892 
Protein GI146307427 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0613463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TCACCGTCCG CGTCGCGGAC TGGCATAGGG ACAATGCCGA GCTTCGCCGC 
ATCCGCGACA GCGTGTTCGT CGCCGAGCAA TCGGTGCCGC CGGAACTGGA GTGGGACGCC
GAAGACACCG ACGCCGTGCA CTTTCTCGCC GAAGAAGGTG ACTACGCGGT GGGCACCGCA
CGCCTGCTGC CGGACGGTCA CATCGGCCGC GTTTCGGTGC TCAAGGACTG GCGCGGCCTG
AAGGTCGGCG AAACCCTGAT GCAGGCGGTG ATCGCCGAAG CGGAAAAGCG CGGCCTGCGT
CAGCAAATGC TCACCGCTCA GGTGCACGCC ACGCCGTTCT ATGAAAGGCT AGGCTTCAGG
ATTGTCAGCG ACGAGTACCT CGACGCCGGC ATACCGCACG TGGATATGGT GCGCACCAGC
CAGTAG
 
Protein sequence
MSEITVRVAD WHRDNAELRR IRDSVFVAEQ SVPPELEWDA EDTDAVHFLA EEGDYAVGTA 
RLLPDGHIGR VSVLKDWRGL KVGETLMQAV IAEAEKRGLR QQMLTAQVHA TPFYERLGFR
IVSDEYLDAG IPHVDMVRTS Q