| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2396 |
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| Symbol | |
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| ID | 5108236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2642913 |
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| End bp | 2644169 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503640 |
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| Product | isocitrate dehydrogenase (NADP) |
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| Protein accession | YP_001187884 |
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| Protein GI | 146307419 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.286181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.119624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATACC AAAAGATCCA GGTGCCAGCC AGCGGTGACA AAATTACCGT CAATGCCGAT
ATGTCGCTGA ACGTTCCGAA CAATCCGATC ATCCCGTTCA TCGAGGGTGA CGGTATCGGC
GTCGATATTT CCCCGGTGAT GATCAAGGTC GTCGACGCTG CCGTCGAAAA AGCCTATGGC
GGCGCCCGCA AGATCTCCTG GATGGAAGTT TATGCCGGTG AGAAGGCCAC TCAGGTTTAC
GATCAGGACA CCTGGCTGCC GAAAGAAACC CTCGAGGCCG TACGTGATTA CGTGGTCTCG
ATCAAAGGCC CGTTGACCAC GCCTGTTGGC GGCGGCATCC GTTCGCTGAA CGTGGCTTTG
CGTCAGGAGC TCGACCTCTA TGTCTGCCTG CGTCCGGTGC GCTGGTTCGA GGGCGTACCC
AGCCCGGTGA AGAAGCCGGG TGATGTGGAC ATGGTGATCT TTCGCGAGAA CTCCGAAGAC
ATCTATGCCG GCGTCGAGTG GAAGGCCGGC AGCCCCGAGG CCGAGAAGGT CATCAAGTTC
CTCACCGAGG AAATGGGCGT CAAGAAGATC CGCTTCACCG ACATGTGCGG TATCGGCATC
AAGCCGGTTT CCGAGGCAGG CACCAAGCGC CTGGTGCGCA AGGCCCTGCA GTACGCCGTG
GACAACGACC GCAGCTCGGT GACCCTGGTG CACAAGGGCA ACATCATGAA GTTCACCGAA
GGTGCCTTCA AGGAGTGGGG CTACGAGATC GCCCGCGAGG AGTTCGGCGC CGAGCTGCTC
GATGGCGGCC CATGGATGCA GTTCAAGAAC CCGCGTACCG GCAAGAACAT CGTGGTCAAG
GACGTGATCG CCGATGCCAT GCTGCAGCAG ATCCTGCTGC GCCCGGCCGA GTACGACGTG
ATCGCCACGC TCAACCTCAA CGGTGACTAC CTCTCCGACG CATTGGCGGC CGAGGTCGGT
GGCATCGGTA TCGCGCCTGG CGCCAACCTG TCCGATTCGG TGGCCATGTT CGAGGCAACT
CACGGTACCG CGCCGAAGTA TGCCGGTCAG GACAAGGTCA ACCCGGGCTC GGTCATTCTC
TCTGCGGAGA TGATGCTGCG CCACATGGGC TGGAGCGAGG CGGCCGATCT GATCATCAAG
GGCACCAACG GCGCCATTGC CGCCAAGACC GTGACCTATG ACTTCGAGCG TCTGATGGAG
GGGGCGAAAC TGATGTCCTG CTCCGAATTC GGCGATGCGA TGATCAGCCA CATGTGA
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| Protein sequence | MGYQKIQVPA SGDKITVNAD MSLNVPNNPI IPFIEGDGIG VDISPVMIKV VDAAVEKAYG
GARKISWMEV YAGEKATQVY DQDTWLPKET LEAVRDYVVS IKGPLTTPVG GGIRSLNVAL
RQELDLYVCL RPVRWFEGVP SPVKKPGDVD MVIFRENSED IYAGVEWKAG SPEAEKVIKF
LTEEMGVKKI RFTDMCGIGI KPVSEAGTKR LVRKALQYAV DNDRSSVTLV HKGNIMKFTE
GAFKEWGYEI AREEFGAELL DGGPWMQFKN PRTGKNIVVK DVIADAMLQQ ILLRPAEYDV
IATLNLNGDY LSDALAAEVG GIGIAPGANL SDSVAMFEAT HGTAPKYAGQ DKVNPGSVIL
SAEMMLRHMG WSEAADLIIK GTNGAIAAKT VTYDFERLME GAKLMSCSEF GDAMISHM
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