| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2395 |
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| Symbol | |
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| ID | 5108235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2642568 |
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| End bp | 2642837 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640503639 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_001187883 |
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| Protein GI | 146307418 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.80282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0844989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAGTG GTAAGGTCAA GTGGTTCAAC AACGCCAAGG GCTATGGATT CATCCTGGCC
GATGGCCGAG ATGAGGACCT GTTCGCCCAC TACTCGGCCA TCCAGATGGA CGGTTATAAA
ACACTCAAGG CCGGCCAGCC GGTCCGCTTC GAGATCGTGC AAGGCCCTAA AGGACTGCAT
GCGGTCAATA TCAGCGCGGT TACCGCCACC CAGGACGCCC CAGCGGCCGT ACCCCAGGCG
CAAAATATCG CGAGCACTGT CGAAGTCTGA
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| Protein sequence | MLSGKVKWFN NAKGYGFILA DGRDEDLFAH YSAIQMDGYK TLKAGQPVRF EIVQGPKGLH
AVNISAVTAT QDAPAAVPQA QNIASTVEV
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