Gene Pmen_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2394 
SymbolclpS 
ID5108234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2641974 
End bp2642336 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID640503638 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_001187882 
Protein GI146307417 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.864742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0826838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCAA GTAGCCAGAT TCGACTAACA TTCAATCAGG ATCACCCGGC AGAGCATGAG 
GACGACTCGT CCGGTATCGC TGTCCAGGAA TCCAAGCCAG CATTGCAGGC ACCACCGATG
TACAAGGTGG TCTTATTCAA TGACGACTAC ACCCCGATGG ATTTTGTCGT CGAAGTGCTT
GAAACCTTTT TCGGCATGAA CCGGGAGCTG GCGACCAAGA TCATGCTGAC CGTCCATACA
GAAGGACGTG CGGTATGTGG CGTGTATACC CGCGATATTG CGGAGACCAA GGCAATGCAG
GTCAACCAGT ACGCGCGGGA GAGTCAGCAT CCGCTACTCT GTGAAATAGA GAAGGACGGT
TAA
 
Protein sequence
MHASSQIRLT FNQDHPAEHE DDSSGIAVQE SKPALQAPPM YKVVLFNDDY TPMDFVVEVL 
ETFFGMNREL ATKIMLTVHT EGRAVCGVYT RDIAETKAMQ VNQYARESQH PLLCEIEKDG