Gene Pmen_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2392 
SymbolinfA 
ID5108232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2639395 
End bp2639613 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content56% 
IMG OID640503636 
Producttranslation initiation factor IF-1 
Protein accessionYP_001187880 
Protein GI146307415 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0390575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAG AAGACAGCTT CGAAATGGAA GGCACTGTCG TCGACACCCT GCCCAACACC 
ATGTTCCGCG TGGAGTTGGA AAACGGGCAC GTCGTTACCG CGCACATCTC CGGCAAGATG
CGCAAGAACT ACATCCGCAT TCTCACTGGT GACAAGGTGC GCGTCGAGCT GACACCTTAT
GACTTGAGCA AGGGCCGCAT CACCTACCGC GCCCGTTAA
 
Protein sequence
MSKEDSFEME GTVVDTLPNT MFRVELENGH VVTAHISGKM RKNYIRILTG DKVRVELTPY 
DLSKGRITYR AR