| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2389 |
|---|
| Symbol | |
|---|
| ID | 5108229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2636811 |
|---|
| End bp | 2637761 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640503633 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_001187877 |
|---|
| Protein GI | 146307412 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0722352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG TCAAGCATTC CCGCCTGATC ATCCTGGGCT CCGGCCCAGC GGGCTACAGC
GCCGCCGTTT ATGCCGCGCG CGCCAACCTC AAGCCTGTGG TCATCACCGG CATCCAGCCC
GGCGGGCAGC TCACCACCAC CACCGAAGTG GACAACTGGC CGGGTGACGT CGAAGGCCTC
ACCGGCCCGG CATTGATGGA GCGCATGCAG AAGCACGCCG AGCGCTTCGA CACCGAGATC
ATCTACGACC ATATCCACAC CGCCGAGTTG CAGAGCCGCC CTTTCGTGCT CAAGGGCGAT
AGCGGCACCT ACAGCTGCGA CGCACTGATC ATCGCCACCG GCGCCAGCGC CCAGTACCTC
GGCCTGCCGT CGGAAGAAGC CTTCTCCGGC AAGGGCGTTT CCGCCTGCGC CACCTGCGAT
GGTTTCTTCT ATCGCAACCA GGTGGTCGCC GTGATCGGTG GCGGCAACAC CGCCGTTGAA
GAAGCGCTTT ATCTGTCGAA CATCGCCAAG GAAGTGCACC TGGTGCACCG CCGCGACAAG
CTGCGCTCGG AAAAGATTCT GCAGGACAAG CTGTTCGACA AGGTCGAGAA CGGCAACATG
CGCCTGCACT GGAACCACAC CCTGGACGAA GTGCTGGGCG ACCAGAGCGG CGTGACCGGT
GTGCGCCTAA AAAGCACCCT CGACGGCAGC ACCAAGGAAC TGGCGCTGGC CGGCGTGTTC
ATCGCCATCG GCCACAAGCC CAATACCGAG CTGTTCGTCG GTCAGCTGGA CATGCATGAC
GGCTACCTGA AGATCAAGGG CGGCAGCGAA GGCAATGCCA CCGCCACCAG CATCGAGGGC
GTATTCGCCG CCGGCGACGT GGCCGACCAC GTCTACCGCC AGGCCATCAC CTCAGCCGGC
GCCGGCTGCA TGGCCGCGCT GGATGTCGAG AAGTTCCTCG ACAACAACTG A
|
|---|
| Protein sequence | MSEVKHSRLI ILGSGPAGYS AAVYAARANL KPVVITGIQP GGQLTTTTEV DNWPGDVEGL
TGPALMERMQ KHAERFDTEI IYDHIHTAEL QSRPFVLKGD SGTYSCDALI IATGASAQYL
GLPSEEAFSG KGVSACATCD GFFYRNQVVA VIGGGNTAVE EALYLSNIAK EVHLVHRRDK
LRSEKILQDK LFDKVENGNM RLHWNHTLDE VLGDQSGVTG VRLKSTLDGS TKELALAGVF
IAIGHKPNTE LFVGQLDMHD GYLKIKGGSE GNATATSIEG VFAAGDVADH VYRQAITSAG
AGCMAALDVE KFLDNN
|
|---|
| |