Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2387 |
Symbol | lolA |
ID | 5108227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2633458 |
End bp | 2634084 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640503631 |
Product | outer-membrane lipoprotein carrier protein |
Protein accession | YP_001187875 |
Protein GI | 146307410 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0116989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTTA TTCGCCTGCT GATGCTGGCT GCTCTGAGTT TTACCCTGCT GACCGCCCAG GCCGACGAAG AGGCGGCCAC CAAGCGCCTG ACCGAGCTGC TCAGCCAGGC GCAGACCATC AGCGCGCGTT TCTCCCAACT GACCCTCGAC GCCAGCGGCA CGCAGCTGCA GGAGACCGCC GGGCAACTGG TGCTCAAGCG TCCGGGCCTG TTCCGCTGGC ACACCGATGA GCCCATGGAG CAGCTGCTGG TCTCCAACGG CCAGAAGGTC TGGCTGTACG ACCCGGATCT GGAACAGGTG ACCATCCAGA GCCTCGATCA GCGCCTGACT CATACGCCGG CGCTGCTGCT GTCCGGCGAC GTGTCGCAGA TACGCGAGAA CTTCGAGATC GACTACAAGG AAGGCGGCAG TGTGGTCGAC TTCATCCTCA AGCCCAAGGC CAAGGACAGC CTGTTCGACA GCCTGCGCCT GTCGTTCCGC AATCGCATGC TCAACGACAT GCAACTGATC GACAGCATCG GCCAGCGCAC CAACATCCTG TTCCTCAATG TGAAGATGAA CGAGCCGGTG GAAGACCATC TGTTCACCTT CGACATTCCG GAAGGCGCGG ACGTCATCCA GGAGTAA
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Protein sequence | MRVIRLLMLA ALSFTLLTAQ ADEEAATKRL TELLSQAQTI SARFSQLTLD ASGTQLQETA GQLVLKRPGL FRWHTDEPME QLLVSNGQKV WLYDPDLEQV TIQSLDQRLT HTPALLLSGD VSQIRENFEI DYKEGGSVVD FILKPKAKDS LFDSLRLSFR NRMLNDMQLI DSIGQRTNIL FLNVKMNEPV EDHLFTFDIP EGADVIQE
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