| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2384 |
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| Symbol | |
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| ID | 5108224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2630393 |
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| End bp | 2631673 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503628 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001187872 |
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| Protein GI | 146307407 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00617953 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGATT CCAAACTCGT CCGCACGCAA CTCACCGAAA TCGCCGAGCG CCTCGCTACC
CGTGGCTTCG CCCTCGACGT CGCCCGCTTC GAGGCCCTGG AGAGTCAGCG CAAGTCGGTG
CAGGTGCGCA CCGAGCAACT GCAGGCCGAG CGCAACAGCC GTTCCAAGTC GATCGGTCAG
GCCAAGGCGC GCGGCGAAGA CATCGCGCCG CTGCTGGCGG AAGTCGACCA GATGGGCAGC
GACCTGGAAG CCGGCAAGCG TGAGCTGGAC GCCATCCAGA ACGAGCTGGA CAACCTGCTG
TTGAACATCC CCAACCTGCC GCACGAGTCC GTGCCGGTCG GCGCGGATGA GGACGGCAAC
GTCGAGGTGG CGCGCTGGGG CACCCCGCGC AGCTTCGATT TCGAAATCAA GGATCACGTC
GCCCTCGGCG AGCAGCACGG CTGGCTGGAC TTCGAGACCG CCGCCAAACT GTCTGGCGCG
CGTTTCGCTC TGCTGCGCGG CCCCATCGCG CGCCTGCATC GCGCCCTGGC GCAGTTCATG
ATCAACCTGC ACACCGGCGA ACACGGCTAC GAAGAGGCTT ACACGCCTTA TCTGGTACAG
GCCCCGGCAC TGCAGGGCAC CGGCCAGCTG CCGAAGTTCG AGGAAGACCT GTTCAAGATT
CGTCGTGAAG ACCAGGCCGA TCTGTATCTG ATCCCGACTG CCGAAGTCTC GCTGACCAAT
ATCGTCGCCG GTGAAATTCT CGATGCCAAG CAGCTGCCGC TGAAGTTCGT CGCCCATACC
CCGTGCTTCC GCAGCGAGGC GGGCGCCTCC GGCCGCGACA CCCGCGGCAT GATCCGCCAG
CACCAGTTCG ACAAGGTGGA GATGGTGCAG ATCGTCGAGC CGTCCAAGTC CTTCGAGGCG
CTGGAAGGCA TGACCGCCCA CGCCGAGCGC GTGCTGCAAC TGCTCGAGCT GCCGTACCGC
AAGCTGGCGC TGTGCACTGG TGACATGGGC TTTTCCGCAG TGAAGACCTA CGACCTGGAA
GTCTGGGTGC CGAGCCAGGA CAAGTACCGC GAGATTTCCT CCTGCTCCAA CTGTGGCGAC
TTCCAGGCGC GCCGCATGCA GGCGCGCTAC CGCAACCCGG AAACCGGCAA GCCGGAACTG
GTGCACACCC TCAACGGCTC CGGCCTGGCG GTAGGGCGTA CCCTGGTGGC CGTGCTGGAG
AACTACCAGC AGGCCGACGG CAGCATCCGC GTGCCCGAGG TGCTCAAGCC CTATATGGGC
GGTATCGAGG TGATCGGCTA A
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| Protein sequence | MLDSKLVRTQ LTEIAERLAT RGFALDVARF EALESQRKSV QVRTEQLQAE RNSRSKSIGQ
AKARGEDIAP LLAEVDQMGS DLEAGKRELD AIQNELDNLL LNIPNLPHES VPVGADEDGN
VEVARWGTPR SFDFEIKDHV ALGEQHGWLD FETAAKLSGA RFALLRGPIA RLHRALAQFM
INLHTGEHGY EEAYTPYLVQ APALQGTGQL PKFEEDLFKI RREDQADLYL IPTAEVSLTN
IVAGEILDAK QLPLKFVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ IVEPSKSFEA
LEGMTAHAER VLQLLELPYR KLALCTGDMG FSAVKTYDLE VWVPSQDKYR EISSCSNCGD
FQARRMQARY RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG
GIEVIG
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