Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2376 |
Symbol | |
ID | 5106598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2624551 |
End bp | 2625219 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640503620 |
Product | hypothetical protein |
Protein accession | YP_001187864 |
Protein GI | 146307399 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.128059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.023918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGC GAGACTACGT ACTAAATCAT TCGCAGGCCG ACCAGCTGGA AGTCAGCAAG GTGCTGCGCA ACACCTACGG CTTGCTGGCC ATCACCCTGG CCTTCAGCGG CCTGGTCGCT TTCCTCAGCC AACGCGCCAA CGTGCCGTAC CCGAACTTCT TCGTGGTGCT GATCGGCTTC TACGGCCTGT TCTTCCTCAC CTACAAGCTG CGTAACTCGG CCTGGGGCCT GGTTTCCACC TTCGCCCTGA CCGGCTTCAT GGGCTTCACC CTCGGCCCGA TCCTCAACCG TTACCTGGGC ATGGCCAACG GTGCGGAGGT GATCAGCTCG GCGTTCTCCA TGACCGCGCT GGTGTTCTTC GGTCTGTCCG CCTACGTGCT GACCACCCGC AAGGACATGA GCTTCCTCAG CGGCTTCATC ACTGCCGGCT TCTTCGTCCT GCTCGCCGCC GTCCTGGCCA GCTTCTTCTT CCAGATCAGC GGTCTGCATC TGGCGATCAG CGCCGGCTTC GTGCTGTTCT CCTCGGTCTG CATCCTGTTC CAGACCAGCG CCATCATCCA CGGCGGTGAG CGCAACTACA TCATGGCCAC CATCAGTCTG TATGTGTCGA TCTACAACCT GTTCGTCAGC CTGCTACAGA TCTTCGGCAT CATGGGCGGC GACGACTGA
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Protein sequence | MQERDYVLNH SQADQLEVSK VLRNTYGLLA ITLAFSGLVA FLSQRANVPY PNFFVVLIGF YGLFFLTYKL RNSAWGLVST FALTGFMGFT LGPILNRYLG MANGAEVISS AFSMTALVFF GLSAYVLTTR KDMSFLSGFI TAGFFVLLAA VLASFFFQIS GLHLAISAGF VLFSSVCILF QTSAIIHGGE RNYIMATISL YVSIYNLFVS LLQIFGIMGG DD
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