| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2374 |
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| Symbol | uvrC |
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| ID | 5108214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2621663 |
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| End bp | 2623486 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503617 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001187862 |
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| Protein GI | 146307397 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.483342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0306932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTT CCTTCGATTC GAGCGCCTTC CTGGCGACCT GCAGCGGTCG CCCGGGCGTC
TATCGCATGT TCGACGCCGA TGCCCGTTTG CTCTACGTGG GCAAGGCGAA GAATCTCAAG
AAGCGTCTTT CCAGTTACTT TCGCAAGACC GGTCAGGCGC CCAAGACGGC CGCACTGGTC
GCGCGTATCG CGCAAGTCGA AACCACCATC ACCGCCAACG AGACCGAGGC GCTGCTGCTC
GAGCAGACGC TGATCAAGGA ATGGCGGCCA CCGTACAACA TCCTGCTGCG CGACGATAAG
TCCTATCCCT ATGTATTCCT CTCGGACGGT GAATTCCCCC GACTGGGCAT TCACCGTGGC
GCCAAGAAGG CCAAGGGACG CTATTTCGGC CCCTATCCCA GCGCGCTGGC GATTCGCGAA
AGCCTGAGCC TGCTGCAGAA GACCTTTCTC GTTCGCCAGT GCGAAGACAG CTATTACCGG
AACCGCACGC GGCCCTGCCT GCAGTACCAG ATCAAGCGCT GCAAGGGGCC CTGCGTCGGC
CTGGTCAGCC CGGAAGAGTA CGCAGAGGAC GTGCGCCATT CGGTGATGTT TCTCGAAGGG
CGCAGCAATG CGCTCAGCGA AGAGTTGTCG GCCAGTATGG AAAAGGCCTC CATGGCCCTG
GAGTTCGAGC GCGCCGCTGA ACTGCGTGAT CAGATTTCCA TGCTGCGCCG CGTGCAGGAT
CAGCAGAGCA TGGAAGGCGG CAGCGGCGAC GTCGACGTGG TTGCGGTCAT GCTCAACCCC
GGTGGCGCCT GCGTCCATCT GATCAGCGTG CGCGGTGGCC GCGTGCTGGG CAGCAAGAAC
TTCTTCCCGC AGGTGGCGAT CGAGGAGGAG GGGGGCGAGG TGCTGATGGC CTTCCTCGCC
CAGTACTACC TCGGCAATGC CGAGCGCGAC CTGCCGAGCG AGCTGATCGT CAACGTTCAG
CATGAAGACT TCTCCACCTT GATCGAAGCG GTCGAGTCGC TGCGCGGGCG CAGCCTCAGC
ATCAGCCTGC GCGTGCGCGG CACCCGTGCG CGCTGGCAAC AACTGGCCGT TACCAACGCC
GAGCAGGCGC TGGCGGCGCG TCTGGCCAAC CGGCAGCATT TGGCCGAGCG CTTCGAGGCG
TTGGCCACCG TACTGGAAAT GGATGAGCCG CCGCAGCGCA TGGAATGCTT CGATATCAGC
CATTCCAGCG GCGAAGCGAC GGTCGCCTCC TGCGTGGTAT TCGGTCCCGA AGGGCCGCTG
AAGTCCGACT ATCGCCGCTT CAACATCGAA GGCGTCACGC CCGGTGATGA CTATGCGGCG
ATGCACCAGG CGTTGACACG GCGGTTCAGC AAGATCAAGG ACGGCGAGGG CAAGCTGCCC
GATGTACTGC TGGTGGACGG CGGCAAAGGG CAACTGGCCA TGGCGCGGGA AGTGCTGCAG
GAGCTGGCGG TGCCGGACCT GATTCTGCTC GGCGTGGCCA AGGGCACGAC ACGCAAGCCG
GGCCTCGAGG TGCTCTACCT GAACGATGCC GAGCATGAGT TCACCTTGCC GGGCAATTCT
CCCGCGCTCC ATCTGATCCA GCAGATTCGC GACGAGTCGC ACCGCTTCGC CATTACCGGG
CACCGTGCGC GACGCGGCAA GGCCCGTCGT ACCTCGACGC TGGAAGAGGT GGCCGGTATC
GGTCCCAAGC GGCGGCGCGA GCTGCTCAAT CACTTCGGCG GGCTGCAGGA ACTGTCCCGC
GCCAGTGCCG AGGAAATCGC CAAAGCGCCG GGAATCAGCA AAAAGCTCGC AGAGTTGATT
TATGCCACCC TGCACAGCGA GTAG
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| Protein sequence | MSVSFDSSAF LATCSGRPGV YRMFDADARL LYVGKAKNLK KRLSSYFRKT GQAPKTAALV
ARIAQVETTI TANETEALLL EQTLIKEWRP PYNILLRDDK SYPYVFLSDG EFPRLGIHRG
AKKAKGRYFG PYPSALAIRE SLSLLQKTFL VRQCEDSYYR NRTRPCLQYQ IKRCKGPCVG
LVSPEEYAED VRHSVMFLEG RSNALSEELS ASMEKASMAL EFERAAELRD QISMLRRVQD
QQSMEGGSGD VDVVAVMLNP GGACVHLISV RGGRVLGSKN FFPQVAIEEE GGEVLMAFLA
QYYLGNAERD LPSELIVNVQ HEDFSTLIEA VESLRGRSLS ISLRVRGTRA RWQQLAVTNA
EQALAARLAN RQHLAERFEA LATVLEMDEP PQRMECFDIS HSSGEATVAS CVVFGPEGPL
KSDYRRFNIE GVTPGDDYAA MHQALTRRFS KIKDGEGKLP DVLLVDGGKG QLAMAREVLQ
ELAVPDLILL GVAKGTTRKP GLEVLYLNDA EHEFTLPGNS PALHLIQQIR DESHRFAITG
HRARRGKARR TSTLEEVAGI GPKRRRELLN HFGGLQELSR ASAEEIAKAP GISKKLAELI
YATLHSE
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