| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2367 |
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| Symbol | |
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| ID | 5108209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2613040 |
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| End bp | 2614008 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503609 |
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| Product | luciferase family protein |
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| Protein accession | YP_001187857 |
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| Protein GI | 146307392 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03571] luciferase-type oxidoreductase, BA3436 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.184521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000901573 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCACTC CGAATTCCAT TCCCTATCAG CAACAACCTG GCTTTCAGCG CACTTACCGC
CAAGGCCGCC TGACCCTGGG TCTTTTCTTC CCTCTCGAAG CCTTTGCCGG TGATACGCCG
AGCATGCTCG ACCAGGCGAG CCTGGCCCAA CGTGCCGACA AGCTGGGTTT CTCTGCTCTC
TGGTTTCGCG ACGTGCCGTT ACGTGACCCC AGTTTTGGCG ATTCGGGTCA GGTCTTCGAT
CCTTGGGTCT ACCTGGGTTT TATGGCGGCG CACACACACT CGATTGCCCT GGGTACCGCC
TCGATCATCC TGCCAATCCG CAATCCCCTG CATACCGCCA AGGCCGCAAC CAGTGTCGAT
CAGCTCAGCG GTGGCCGCCT GTTACTCGGT GTGGCTTCCG GTGACCGGCC GGTGGAGTTT
CCCGCATTCG GTGTCGACCC GGAGCAACGC GACAGCCTGT TCCGCGAATA CCTCGCAGTA
TTTCGCGAGG TTCAGCGCAG CAGTTTCGTG CCTTTGACCT GGTCCGGCGG GACGCTTGAG
GGCGCGGATC TGATTCCCAA GCCGACCACG GCGGAAATTC CGTTCTTTGT CACCGGCCAT
AGCCGCCAGA CGCTGGAATG GATCGCCCGC TACAGTCATG GCTGGATCAG TTATCCGCGC
GCCCCGAAGA CGCAGGCGCT GATTGTCGAG AACTGGCGCG CTGCGGTTCG TACCGAATGC
GGTGAGCTGT TCAAACCCTT CACCCAGTCG CTATACATCG ACCTGACGGA TAACCCGCAG
ACACCACCTC GCCCGATCCA CCTGGGCTAT CAACTAGGGC GATATCACCT GATCTCGTTG
CTGGAAAGCT TGCAGGAGAT CGGGGTTAAC CACGTGATCG TCAATCTGAA ATACGGCCAG
CGCCCCGCGA GCGAGGTTAT CGAGGAACTC GGTCAGTTCG TGCTACCCAA CTTCGTCCTG
TCGACATGA
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| Protein sequence | MFTPNSIPYQ QQPGFQRTYR QGRLTLGLFF PLEAFAGDTP SMLDQASLAQ RADKLGFSAL
WFRDVPLRDP SFGDSGQVFD PWVYLGFMAA HTHSIALGTA SIILPIRNPL HTAKAATSVD
QLSGGRLLLG VASGDRPVEF PAFGVDPEQR DSLFREYLAV FREVQRSSFV PLTWSGGTLE
GADLIPKPTT AEIPFFVTGH SRQTLEWIAR YSHGWISYPR APKTQALIVE NWRAAVRTEC
GELFKPFTQS LYIDLTDNPQ TPPRPIHLGY QLGRYHLISL LESLQEIGVN HVIVNLKYGQ
RPASEVIEEL GQFVLPNFVL ST
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