| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2363 |
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| Symbol | |
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| ID | 5108205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2608833 |
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| End bp | 2610236 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503605 |
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| Product | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein |
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| Protein accession | YP_001187853 |
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| Protein GI | 146307388 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000880106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00124341 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAGGG AAATCCTCCT CAACGCCTTC AACATGAACT GCATCGGGCA CATCCATCAC
GGGCTGTGGA CGCACCCGCG CGACCGCTCG ACCGAGTTCA ACCAGTTGAG CTACTGGACG
GAACTGGCCC AACTGCTCGA GCGCGGCCTG TTCGACGGGC TGTTCATCGC CGATATCCTC
GGCGTCTACG ACGTCTACCA GAACGGCATC GACCTGCCGC TGCAGGAGGC CATCCAGCTG
CCGGTCAACG ACCCGTTGCT GCTGGTTTCG GCCATGGCCG GCGTGACCCG GCACCTGGGT
TTCGGCGTGA CCGCCAACCT CAGCTACGAG GCGCCCTACA CCTTCGCCCG GCGCCTTTCG
ACCCTTGATC ACCTCACTCA AGGTCGCGTG GGCTGGAACA TCGTCACCGG CTACCTGGAC
AGCGCTGCCA AGGCCATGGG CCGCCCACAG CAGGTCGAGC ACGACCGCCG CTACGACCAG
GCCGACGAGT ACCTGCAGGT GCTCTACAAA CTGCTCGAAG GCAGCTGGCA GGACGATGCC
GTGCTGGCCG ACCGCGAGCG GCGCGTCTAC GCCCAGCCGG GCAAGGTGCA TAAGGTGCGC
CACCAGGGCG AGTTCTATCA GGTCGAGGGG TATCACCTCA GCCAGCCGTC GCCGCAGCGC
ACGCCACTGT TGTTCCAGGC CGGCTCGTCA CCACGCGGGC TGCGTTTTGC CGGCGAGCAT
GCCGAGTGCG TGTTCATCGG CGGCAACGAT CACGCGGCGG TGCGCGCTCA GGTCGACAAG
GTACGCGCCA GCGCCGTGGC GGCCGGCCGC ACGGCCGAGG CGATCAAGGT GTTCATGGGT
ATCGCCGTGA TCGTCGCGCC GAGCGAAGCC GAGGCCCGCG ACAAGCACGC CGAGTACCTG
CGCTACGCCA GCCCGGAAGC CGGTATCGCG CATTTCTCCA GCTCCACCGG CATCGACCTG
GACGCCTTCG GCCTGGACGA GCCGATCCAG CCGCGCAAGA CCAACGCCAT CGAGTCGGTG
GTCAAGACCT TCAGCGGCTG GACCAAGCGG CGTCTGCTCG AGCAGCACGC CCTTGGCGGC
CGCTACCCGC TGGTGGTCGG CGCGCCCGAG CAAGTGGCCG AACAACTGAT CGCCTGGATC
GACGCCACCG GCCTGGACGG TTTCAACCTG ACGCGCATCG TCACCCCGGA AAGCTACGCC
GACTTCATCG ACCTGGTGAT CCCCGAGCTG CAACGCCGGG GCCGCTACAA GACCGCCTAC
GCAGACGGTG CCCTGCGCCA CAAGCTGTTC GGCCAGGGCC CGCGCCTGCC GGCCGATCAC
CCCGGTGCGG CGTTTCGCCA ACACATCGAA ACTTTTCACA GCCCCCGTAG GAGCCAGCTT
GCTGGCGATC AATCACACCG CTGA
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| Protein sequence | MAREILLNAF NMNCIGHIHH GLWTHPRDRS TEFNQLSYWT ELAQLLERGL FDGLFIADIL
GVYDVYQNGI DLPLQEAIQL PVNDPLLLVS AMAGVTRHLG FGVTANLSYE APYTFARRLS
TLDHLTQGRV GWNIVTGYLD SAAKAMGRPQ QVEHDRRYDQ ADEYLQVLYK LLEGSWQDDA
VLADRERRVY AQPGKVHKVR HQGEFYQVEG YHLSQPSPQR TPLLFQAGSS PRGLRFAGEH
AECVFIGGND HAAVRAQVDK VRASAVAAGR TAEAIKVFMG IAVIVAPSEA EARDKHAEYL
RYASPEAGIA HFSSSTGIDL DAFGLDEPIQ PRKTNAIESV VKTFSGWTKR RLLEQHALGG
RYPLVVGAPE QVAEQLIAWI DATGLDGFNL TRIVTPESYA DFIDLVIPEL QRRGRYKTAY
ADGALRHKLF GQGPRLPADH PGAAFRQHIE TFHSPRRSQL AGDQSHR
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