Gene Pmen_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2358 
Symbol 
ID5108200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2604220 
End bp2604549 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID640503600 
Producthypothetical protein 
Protein accessionYP_001187848 
Protein GI146307383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.28152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000380376 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATAACG CTCGTTTCGA ATCCTGCATC AAGGCCTGCC TGGACTGCGC GGTGGCCTGC 
GACCATTGCT TCGGCGCCTG CCTGGGCGAA TCAGAGGTGC AGATGATGGC GCGCTGCATA
GGCCTGGACC GCGAATGCTC GGAAATCTGC CGGCTCGCCG CGTCGCTGAT GGCCAGCGGC
AGTGACTCGG CAAGCGCGCT CTGCAAGGTC TGCGCGGACA TCTGCAGGCA GTGCGGAGAG
GAGTGTGCCA AGCACGAGGC CGAGCATTGC CAGCAGTGTG CCAAGGCCTG CATGCACTGC
GCCGAACAGT GCAGCCAGAT GGCCGCCTGA
 
Protein sequence
MHNARFESCI KACLDCAVAC DHCFGACLGE SEVQMMARCI GLDRECSEIC RLAASLMASG 
SDSASALCKV CADICRQCGE ECAKHEAEHC QQCAKACMHC AEQCSQMAA