| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2357 |
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| Symbol | |
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| ID | 5108199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2603149 |
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| End bp | 2604126 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503599 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001187847 |
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| Protein GI | 146307382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.486705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000279789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAAAG TCGACCATCG CGTCGTGGTG ATCTGCGGCG CCAGCGCAGG CGTGGGGCGC
GCCACCGCCC ATGCTTTCGC CGCCGCCGGT TATGCCATAG GTCTGCTCGC CCGTAGCGAC
GAGGGCCTGG CGCTGACCGA AGAGGAGCTG CAGGCCTATG GCGTGCCCAC CCTGGCGGTC
AGTGTGGATG TGGCCGATGC GCAGGCGCTC ACCCTGGCCG GGCAACGTTT CGAAGCCGAA
CTCGGCCCGG TCGATGTCTG GATCAATTCG GCGATGGTGA CGGTGTTCGC TGCGGTGGAG
CAGCTGATGC CGGACGAAAT CAGGCGGGTT ACCGAGGTGA CCTATCTGGG CACGGTGCAT
GGCACGCTGG CGGCGCTCGC GCTGATGCGG CCACGCAATC GCGGCGTGAT CATCCAGGTC
GGTTCGGCGC TCGCCTACCG CGCGATTCCC CTGCAATCGG CCTATTGCGG GGCGAAGTTT
GCGATACGGG GCTTTACCGA CTCGCTGCGC TGCGAACTGA TCCACCAGGG CAGCAGCATC
AAGCTCTGCA TGGTTCAGCT GCCAGCGATC AACACGCCGC AATTCGACTG GGCCCGCAAC
AAGCTGGGCA AGCGGGTGCA GCCCGTGCCT CCGATACATG ACCCCGAGGT CGCCGCACGG
GCGATTCTCA GCGTCGCCAG CGCGCCGCCG AGAGAGCTCT GGGTCGGCAC GCCCACCTTC
AAGGCGATCA TCGGCACCCT GCTGTTTCCC GGCTTGCTCG ATCGGCTCAT GGCACGTGCC
GCGTGGTCCG GGCAGATGGT GGACGATACC CAGGCAGAGC CCGAAGCCGG AAATCTGTTC
GAACCCGTGA ACGGTCTGCA CGAGGTACGT GGGCGCTTTA CCCGCAACGC GCGAAAGCAC
GCCTGGACAT TGAGCGCCAG CCGGGTGGTC GCGGTGCTGG GCATCTGCGC GGTCCTGCTG
GCCTTGCTGC TGATCTGA
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| Protein sequence | MNKVDHRVVV ICGASAGVGR ATAHAFAAAG YAIGLLARSD EGLALTEEEL QAYGVPTLAV
SVDVADAQAL TLAGQRFEAE LGPVDVWINS AMVTVFAAVE QLMPDEIRRV TEVTYLGTVH
GTLAALALMR PRNRGVIIQV GSALAYRAIP LQSAYCGAKF AIRGFTDSLR CELIHQGSSI
KLCMVQLPAI NTPQFDWARN KLGKRVQPVP PIHDPEVAAR AILSVASAPP RELWVGTPTF
KAIIGTLLFP GLLDRLMARA AWSGQMVDDT QAEPEAGNLF EPVNGLHEVR GRFTRNARKH
AWTLSASRVV AVLGICAVLL ALLLI
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