Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2335 |
Symbol | |
ID | 5108570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2578122 |
End bp | 2579159 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503577 |
Product | 3-oxoacyl-(acyl carrier protein) synthase |
Protein accession | YP_001187825 |
Protein GI | 146307360 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00405525 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0104415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC TGTGCATTCT CGGCTCCGGC ATGGTCAGCG CGGTCGGCCT CAGCGCCCCG GCCAGTTGCG CGGCCATTCG CTGCGCCATC GACAACTTCC AGGAAACCCG CTTCATCGAC CGTGGCGGCG AATGGCTGAT CGCCGCCAGC GTGCCGCTGG AACAACCTTG GCGCGGCCGC ACCAAGCTGA TCCAGATGGC CGCCCGCGCC GTCGCCGAAG CCCTGCAGAG CACGCCTGGG GTCTACCCGG CGCAAACCCC GCTGCTGCTC GGCGTGGCCG AACAGGAGCG CCCCGGACGC CTCGACGGTT TGGACATCGA ACTGCTGCAC GATATCGAAC GGGAGCTGGG CCTGGCCTTT CATCCCAGCT CCAACGTCAT CGCCCGCGGC CGCGTGAGCG GCGCCGTGGC ACTACTCAAT GCACGCAAGC TGATCTACCA GGGCGGCCAT CGCCACGTGC TGATCGCCGG TGTCGACTCC TTTCTCAGCG CACCGACCCT GGCCGCCTTC GAGGAGCGCG AGCGCCTGCT GACCAGCCAG AATTCCAACG GCTTCATTCC CGGTGAAGGC GCCGCTGCCG TGGTGATCGG CGCTCCGGTC GCCAGCGAGG AACCGCAACT GGCCTGCCTC GGCCTGGGCT TCGGCATGGA GCCGGCCACC GTGGAAAGCG AAGACATCCC CCTGCGCGCC GAAGGCCTGA CCCAGGCCAT CCGCGCCGCT CTGGCCGAAG TGGGCTGCGG CCTGGAACAG ATGGACTATC GCGTCACCGA TCTATCCGGC GAGCAGTACT ACTTCAAAGA GGCCTCGCTG GCGCTCAGTC GCACCTTGCG CGTGCGCAAG GAGTTCTTCC ATATCTGGCA CCCGGCCGAC TGCATCGGCG AAGTCGGCGC CGCCATCGGC CCGGCCATGC TCACCGTGAC CCTGGCCGCC AGCCGCAAGG CTTACGGCGA TGGCCCGAAC ATCCTCTGTC ACCTCGGCAA CGACGCCGGC CAGCGCGCCG CCGCCCTGCT CAGCTACCAA ACGGTGAGGG CTGCCTGA
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Protein sequence | MSALCILGSG MVSAVGLSAP ASCAAIRCAI DNFQETRFID RGGEWLIAAS VPLEQPWRGR TKLIQMAARA VAEALQSTPG VYPAQTPLLL GVAEQERPGR LDGLDIELLH DIERELGLAF HPSSNVIARG RVSGAVALLN ARKLIYQGGH RHVLIAGVDS FLSAPTLAAF EERERLLTSQ NSNGFIPGEG AAAVVIGAPV ASEEPQLACL GLGFGMEPAT VESEDIPLRA EGLTQAIRAA LAEVGCGLEQ MDYRVTDLSG EQYYFKEASL ALSRTLRVRK EFFHIWHPAD CIGEVGAAIG PAMLTVTLAA SRKAYGDGPN ILCHLGNDAG QRAAALLSYQ TVRAA
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