| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2322 |
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| Symbol | |
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| ID | 5108557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2563855 |
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| End bp | 2564370 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503564 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187812 |
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| Protein GI | 146307347 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0239725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0114186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACC CCAGCAGCCA GAAATTCATC GCTCGCAACC GTGCTCCACG GGTGCAGATC
GAGTACGACG TGGAGCTCTA CGGCGCGGAG AAGAAGGTCC AGCTGCCCTT CGTCATGGGG
GTGATGGCCG ATCTCGCGGG CAAGCCCGCC GAGCCGCTGC CGGCGGTAGC TGACCGCAAG
TTCCTGGAGA TCGACGTGGA CAACTTCGAC TCCCGGCTCA AGGCGATGAA ACCGCGCGTC
GCCTTCAACG TGCCCAACAC CCTCACCGGT GAAGGCAACC TCAGCCTCGA CATCACCTTC
GAGAGCATGG ACGACTTCAG CCCCGCCGCC GTGGCGCGCA AGGTCGATGC CCTCAATCAA
CTGCTCGAAG CCCGCACCCA GCTGGCCAAC CTCCTGACCT ACATGGACGG CAAGACCGGT
GCCGAGGAAA TGATCATGAA GGCGATCAAG GATCCGGCCC TGCTGCAGGC GCTGGCCAGT
GCACCGAAAC CGACCGATTC CGAGCCGCAG AGCTGA
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| Protein sequence | MANPSSQKFI ARNRAPRVQI EYDVELYGAE KKVQLPFVMG VMADLAGKPA EPLPAVADRK
FLEIDVDNFD SRLKAMKPRV AFNVPNTLTG EGNLSLDITF ESMDDFSPAA VARKVDALNQ
LLEARTQLAN LLTYMDGKTG AEEMIMKAIK DPALLQALAS APKPTDSEPQ S
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