| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2321 |
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| Symbol | |
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| ID | 5108556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2562769 |
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| End bp | 2563791 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503563 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001187811 |
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| Protein GI | 146307346 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00990234 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00936669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTGGACG TACAACAGCT TTTGACTGCC ATCTCACCCG ACTCGCCGAG CGGGGATGAC
CTCGAATACG ACGCCGCTTT TCTCGAACTG GAGCGCACCG CACAAGGCCA ACCCGAACGT
CAGATGGGCG ACTCGGTATT GCCTGCCGAG CCGCCGGACT GGCGCCAGGT CCGTGAGCAG
AGCGCAGCAC TGTTCGCGCG CAGCAAGGAC CTGCGCATCG CCAATTACTA CCTGCAGAGC
AGCATCGTGC TGGACGGCGT CGCCGGCCTG GCCCAGGCGC TGCAATTGAT CCAGGCGTTG
CTGCAGCAGT TCTGGGACAG CCTTCACCCC GTGCTGGACG CCGACGACGA CAACGACCCC
ACCTTCCGCA TCAACGCCCT GGCCGGCATC AGCGCCGAAC CGGTGGTGCG TCTGCTGTGG
GACATGCCGC TGATCCGTTC ACGCGCCTTC GGCACCGTCA CCCTGCGTGC AGCGCTCAAT
GCCAGCGGGC TGCAGCGCTT CACCAGCGAG AGCATGAGCC TCGAGCAGGT CGGCGCCGCC
TTTCGCGACA GCGACGCGGA ACAGGTCGAG GCCTGTCGCG CCGCGATCAC GGCCGCCCAG
GCGGCGCTGC AGGGCATCGA GCGCGAAGTC AACGAGCGCG TGGGCTCCGA TCGCGGAGCC
GAACTCGGCG CGATCAAGCA GCTGTTGCGC CACGCCGTGC ACATCGTCAA CGAGCATGCG
CCCGCCGCAG GCGGCGAGCA GGCCAGCTCC GAGCAGCCTG CGCCCGCCGA GCCAGGCGAA
GTCGCAGCCG TCAGTGCCTC GGCGCCGCGG CCGAGCGGCG AGATCAACCA TCGCGACGAT
GTGCTCAAGG CGCTCGACCG CATCCTCGCC TATTACGCCA GGCACGAGCC CTCCAGCCCG
GTTCCGGTGC TGCTCAACCG TGCCAAGACC CTGGTCAACG CCGACTTCGC CACCATCGTG
CGCAACCTGA TCCCGGACGG CTTTTCCCAG TTCGAACGCT TCCGGGGACC GGAAGGCGAA
TAG
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| Protein sequence | MVDVQQLLTA ISPDSPSGDD LEYDAAFLEL ERTAQGQPER QMGDSVLPAE PPDWRQVREQ
SAALFARSKD LRIANYYLQS SIVLDGVAGL AQALQLIQAL LQQFWDSLHP VLDADDDNDP
TFRINALAGI SAEPVVRLLW DMPLIRSRAF GTVTLRAALN ASGLQRFTSE SMSLEQVGAA
FRDSDAEQVE ACRAAITAAQ AALQGIEREV NERVGSDRGA ELGAIKQLLR HAVHIVNEHA
PAAGGEQASS EQPAPAEPGE VAAVSASAPR PSGEINHRDD VLKALDRILA YYARHEPSSP
VPVLLNRAKT LVNADFATIV RNLIPDGFSQ FERFRGPEGE
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