| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2320 |
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| Symbol | |
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| ID | 5108555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2560951 |
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| End bp | 2562393 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503562 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001187810 |
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| Protein GI | 146307345 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00351705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00389608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACTGC GTCTGACCAT CACCAGTTAT CACAAGCTGA CACCCGGGCA GCGCGCGGAG
GTGGAACTCG ACCAGGGAGA GCTCAAGATC GGGCGTAATC AGGACAATGA CTGGGTTCTG
CCGGACCCCG AGCGCCTGGT TTCCGGACAA CACTGCGTGA TCCAGTTTCG CGGTGGCACC
TACTATCTGA CCGACACCAG CACCAATGGC GTGCAACTCG TCAACGCGGG CATCCGCATG
CATCGCGGCA ACAGCGAACC GCTGCACGAT GGCGAGCTGA TTCGCCTCGG TGAATACGAC
ATTCTGGTGC ATCTGAGCAG CGCCAATTTT TCGACAGAAA CGCCGGTGAT GGCCAGTAGC
GATCCCTTCA CCGGCTTCGA TGCGCTCATG AGTCGCCAGG GCGGCAGCGC TGCGGTTTTC
CCCGAGCCGG CAGCGCCTTC CACCTTCTCG GTGCAGATGC AGCCCGGCGG TTCGCCACTG
GATACCAAAC CCGATCTGTT CGATTTTCTC GCCGCGCCGG CGGTGCCGCC GCCTACCTTG
CCGGACCATG TACCGGCCGA GCGCCACGAC TTTCGCCCAC CGCAGCCGCA ACAACCGCCC
CAGGCGCCGG CTGTGGATGC CCCAGCCGTG TCGTCGGCCC CGGCCATCCC AGCGGACTGG
GACCCGTTCG CCGACCTGGG CATCGCCCCG GCGTCGCCGC CCGCGCCGCC GCAGCCGATT
CCACCAGCCC CGCCGGTGGC AGCGCCTGAA CCCGTGCAAG CCAAGGCTCT CGAGCCTCAG
CCAGCGGCGA TTGCCGCCAG CGCCAAGCCG GCCGCGCCGA GCAGCGCCGC CCCTGCACCT
GCAGCAGCCA TGAACAGCGA TGCCCTGGAG GCATTTCTGC GTGGCGCCGG TGTAGACCAG
CTGCGCATCG ACCGTGGCGA GGCCCTGGCG CAGATGGAGG CCATCGGTCG CAGCTATCGG
CAGATGGTCG AGGGCCTGGT GGACGTGTTG CGTGCCCGGG CCAGCCTCAA GGGCGAGTTC
CGCATGGCGC AGACCATGAT CCAGCCGGTG GAAAACAACC CGCTGAAATT CGCGCCGAAC
GTGGAAGAGG CGCTGCTGTT GCTGCTGCGC TCGGGCAATC AGGCCTTCAT GCCGGCCGAC
CAGGCCATCG CCGAGAGTTT CGATGACCTG CGTGCTCACC AACTTGCGGT AATGGCGGGA
GTGCAGGCAG CAATAAAACA TCTGTTGAAG CGCTTCGAGC CGGCAACTCT CGAGGCGCGC
CTGAACAAAC CCTCCGGACT TGGCGGTTTG TTGCCCGGTG CGCGCCAATC CAAGTACTGG
GAGTTGTTCA CGGAAACCTA CGCCAGCATC TCCCGCGAGG CGGAAGACGA TTTCCAGGAC
CTGTTCGGTC GCGAATTCAG TCGAGCATAC GAAGAGCACA GCGCAAAGTT GCGGAGAAGT
TAA
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| Protein sequence | MPLRLTITSY HKLTPGQRAE VELDQGELKI GRNQDNDWVL PDPERLVSGQ HCVIQFRGGT
YYLTDTSTNG VQLVNAGIRM HRGNSEPLHD GELIRLGEYD ILVHLSSANF STETPVMASS
DPFTGFDALM SRQGGSAAVF PEPAAPSTFS VQMQPGGSPL DTKPDLFDFL AAPAVPPPTL
PDHVPAERHD FRPPQPQQPP QAPAVDAPAV SSAPAIPADW DPFADLGIAP ASPPAPPQPI
PPAPPVAAPE PVQAKALEPQ PAAIAASAKP AAPSSAAPAP AAAMNSDALE AFLRGAGVDQ
LRIDRGEALA QMEAIGRSYR QMVEGLVDVL RARASLKGEF RMAQTMIQPV ENNPLKFAPN
VEEALLLLLR SGNQAFMPAD QAIAESFDDL RAHQLAVMAG VQAAIKHLLK RFEPATLEAR
LNKPSGLGGL LPGARQSKYW ELFTETYASI SREAEDDFQD LFGREFSRAY EEHSAKLRRS
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