| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2315 |
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| Symbol | |
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| ID | 5108550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2553488 |
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| End bp | 2554177 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503557 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187805 |
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| Protein GI | 146307340 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00174413 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000205776 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGTGG GCTTCTACGG CAAGCTGGCG AGCCGCGGCG ACTTCATCCA TCGCGGCCTG
CCCAGCGCCT TCATCGAATC CTGGGACGCC TGGCTGGCCA CGGGCATCGC CACCAGCCAG
CAGGAGCTGG GTCCGGCCTG GCTCGATGCC TATCTGGTCA GCCCGCTGTG GCGCTTCGCC
CTGGCGCCGG GCCTGGTAAG TAGCGGAGCG GTCACCGGGG TGATGATGCC CAGCGTCGAC
CGGGTCGGTC GTTATTTCCC GCTGACCATC GCCTGCCTGC TGGACGCCGA TGCCGACCTG
GGCTCGCTGC TCGGCGGCCC GGACGCCTGG TACGAGCAGG CCGAGGCGTT GTTGCTGTCG
ACGCTGGAGG AAGGCAGCGA ATGCGAGGCC TTCGAGGCCG CGGTGGCCGC CCTTGGCGAT
CCGCCCTGCA GCCGGCGCAG GCCGCGCACG CCAGGCTTTC GGCAGATGCA TTTCGGTGTC
GCCAGCCCGG CCGAGCGCCT GGCCGTGCTG GCTCAGCTCA CCTGTGAAGG CGCCAGTCTG
TGGTGGGGGC GCGGCTCGGA GCATGTCGCC GCCGGCCTGC TGTGCTGCGC CGGGATGCCG
GCAGCGCAGG CGTTCAGTGG CCTGTTGCTG GGAGCGGATG TATCGCCGGC TCCCAGCCTG
GCCGCGCAGT TGCAGAGCGA GAGCCGATGA
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| Protein sequence | MTVGFYGKLA SRGDFIHRGL PSAFIESWDA WLATGIATSQ QELGPAWLDA YLVSPLWRFA
LAPGLVSSGA VTGVMMPSVD RVGRYFPLTI ACLLDADADL GSLLGGPDAW YEQAEALLLS
TLEEGSECEA FEAAVAALGD PPCSRRRPRT PGFRQMHFGV ASPAERLAVL AQLTCEGASL
WWGRGSEHVA AGLLCCAGMP AAQAFSGLLL GADVSPAPSL AAQLQSESR
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