| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2311 |
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| Symbol | |
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| ID | 5108546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2547791 |
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| End bp | 2548984 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503553 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187801 |
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| Protein GI | 146307336 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.23479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000274996 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCTGC GCCTGATGGG GCAACTGGCC TGGCACGACT ACCGCCGCGA AGGGCGGCTG
TCGGCCTGCG CGATCCTGGC GCTGGTGGCG GTGCTGGCCC CCCTGCTGGT GCTGTTCGGT
CTCAAGTTCG GCCTGATCAG CACCCTGACC GAACGCCTGG AGCGCGACCC CGGCATCCGC
GAGGTGATTC CGCTGGGCGG CGGGCGCTTC GGCAACGAGG CTATCGCCGA GTTGCGCGCC
CGGCAGGACG TGGCCTTCGT CATCCCGCGC ACGCGGCAGA TCGCCGCCAC GGCCGAGCTG
TCCAGCGACA GCGGGCGGGT GACGGTGGAA ATGATCCCCA CCGCACCGGG CGATCCCCTG
TTGCCGCAGC TGGATCAGCC CCTGGCGCTG GATGCCGTGG TGCTCAGCCA GCGCGCGGCA
GAAAAGCTCG GCGTGGTCGC CGGGGACCAG CTGCAGGCCG CCTTCGGCCG TCAGGTGAGC
GGGCGCAGCG AGTTTCAGCG CACCGGCCTG CGCGTACAGG CGGTGCTGCC GCTCAGCGCC
TTCGCCCGCG ACGCGCTGTT CGCCGATCTG CGTCTGCTGG AGGCCGCCGA AGACTACCGC
GACGGTCTGG CCGTCAGCGC ATTCGGCTGG CCCGGGCAAG AATCCACTGC GGCCGGGCGG
ATCTACCCGA GCTTTCGCCT GTACGCCGCC GACCTCGACA GCGTCGAGGT GCTGCGCCGC
CATTTCGCCG GGCGCAACCT CGAAGTCGCC ACCCAGGCCG AAACCATCGC CCAGGTGCGC
TCGCTCAGCC GCAACCTGAC CCTGGTGTTC TGGATCATCG CCTGCCTGGC GCTGGGCGGC
GCCTTCGCGG CCATGACCGC CAGCGCACTG GCCGCGGTCG AGCGCAAGCG CCGCGCGCTG
TCGGTATTGC GCCTGCTGGG GTTCTCGTCA TCTGCGCTGG TCGCCTTCGT GGTGTTACAG
GCGCTCTATA CCGGTTTGTT CAGCACGCTG CTGGCCTGGG CGCTGTATGC CGGCGCGGAG
TTCGGCCTGA ACCAGCTGTT CCAGCACAGC CCCGGCGAGT ACGCCTGCCG CCTGCTGGCC
GGGCATTACC TGCTGGCCCT GCTGGTCACC CTGTTGTGCA GCAGCCTGGC GGCCGCCTCG
GGCGGCTGGC GGGCTGCACG AATCGAAGCT TCGGAAGGAT TGCGCGATGT CTAG
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| Protein sequence | MRLRLMGQLA WHDYRREGRL SACAILALVA VLAPLLVLFG LKFGLISTLT ERLERDPGIR
EVIPLGGGRF GNEAIAELRA RQDVAFVIPR TRQIAATAEL SSDSGRVTVE MIPTAPGDPL
LPQLDQPLAL DAVVLSQRAA EKLGVVAGDQ LQAAFGRQVS GRSEFQRTGL RVQAVLPLSA
FARDALFADL RLLEAAEDYR DGLAVSAFGW PGQESTAAGR IYPSFRLYAA DLDSVEVLRR
HFAGRNLEVA TQAETIAQVR SLSRNLTLVF WIIACLALGG AFAAMTASAL AAVERKRRAL
SVLRLLGFSS SALVAFVVLQ ALYTGLFSTL LAWALYAGAE FGLNQLFQHS PGEYACRLLA
GHYLLALLVT LLCSSLAAAS GGWRAARIEA SEGLRDV
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