Gene Pmen_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2304 
Symbol 
ID5108539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2541927 
End bp2542394 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID640503546 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001187794 
Protein GI146307329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.49085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00000533583 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCCA TCGAACTGCT GAAGAAGGAC CATGAAACCG TCAAGGAGCT GCTGAGCCGG 
CTCGAGGAAA CCACCGAGCG CGCGGTGCAG ACGCGCAAGA AACTGATCAG CAAGATCGAG
CAGGAACTGA AGATTCATAC CGCGCTGGAA GAGCAGATTT TCTATCCCGC GTTCCGCCAG
GCCGGCAGCA AGGACGATGC GGTGCTGGCC ATCGAGGCGA AGGAAGAACA CCGCGCCGTC
GAGGCGCTGG TGCTGCCGGA CATCAAGCAG ACCTCGCCCT CGACCCTGGA GTTCGCCGGC
CGCGTCAAGG TGCTCAAGGA GCTGCTCGAG CACCATATCG AGGAAGAGGA GAACGACATG
TTCCCGCAGG CCAGAAAGCT CCTCGGCAAG CGTGAACTGG AGGACCTGGG CCAGGCCATG
GAAACCCTGC GCAAATCGCT CAAGCAGGGC GAGGCCAAGG CAGCCTGA
 
Protein sequence
MNAIELLKKD HETVKELLSR LEETTERAVQ TRKKLISKIE QELKIHTALE EQIFYPAFRQ 
AGSKDDAVLA IEAKEEHRAV EALVLPDIKQ TSPSTLEFAG RVKVLKELLE HHIEEEENDM
FPQARKLLGK RELEDLGQAM ETLRKSLKQG EAKAA