| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2300 |
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| Symbol | |
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| ID | 5108535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2536985 |
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| End bp | 2538151 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503542 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001187790 |
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| Protein GI | 146307325 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.394357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00000777829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGCAT TGACCTACCA TGGCAGCCAC GACGTCCGCG TCGATCAGGT CGACGATCCC
AGCATCGAAC AGCCCGACGA CATCATCCTG CGTGTCACCG CCACCGCCAT CTGCGGCTCC
GACCTGCACC TGTATCGCGG CAAGATTCCC CAGGTCAAAC AGGGCGACAT CTTCGGCCAC
GAGTTCATGG GCGTGGTGGA GGAGGCCGGC CCCGCGGTGA CCGCGGTACG CAAGGGCGAC
CGGGTGATCG TGCCGTTCGT GATCGCCTGC GGCAGCTGCT TCTTCTGCCA GCTGGACCTG
CACGCCGCGT GCGAAACCAC CAACCCCGGG CGCGGTGCCA TCCTCAACAA GAAGCAGATT
CCTTCGGGCG CCGCACTGTT CGGCTACAGC CACCTGTATG GCGGCGTGCC GGGTGGCCAG
GCCGAGCTGG TGCGCGTGCC TAAGGCCAAT GCCGGCCCGT TCAAGGTGCC CGACGAGCTG
GACGACGAGC AGGTGCTGTT TCTCACCGAC ATCCTGCCCA CCGGTTACCA GGCGGCAATC
AACGCCGGCA TCAAGCCCGG CAGCAGCGTG GCCATCTACG GCGCCGGGCC GGTAGGGCTG
ATGAGCGCGG CCTGCGCGCG TATGCTCGGC GCCGAGCAGA TCTTCATGGT CGATCACCAT
GACTACCGCC TGCAGTACGC CCAGCAGACC TACGGCGTGG TGCCGATCAA CTTCGACGTG
GTCGACGACC CGGCCGCGGC GATCATCGAG CAGACCGCGG GCCACCGCGG TGTGGATGCG
GTGATCGATG CGGTGGGCTT CGAAGCCAAG GGCAGCCTGA CGGAAACCGT GCTCACCGCC
CTCAAGCTGG AGGCCAGCAG CGGCGTGGCC TTGCGTCAGT GCATCGCCGC CGTGCGACGC
GGCGGTACGG TCAGCGTCCC CGGCGTCTAT GCCGGCTTCA TCCACGGCTT TCTGTTCGGC
GATGCCTTCG ACAAGGGCCT GACCTTCAAG ATGGGCCAGA CCCACGTGCA CCCGCTCTTG
CCGACATTGC TGCAGCACGT GCTCGAAGGC GAGCTGCGCC CGGAAATCAT CATCAGCCAT
CGCCTGCCTC TCGCTGAAGC GGCCGAGGGC TATCGCATCT TCGAATCGCG CAAGGAAGAG
TGCCGCAAGG TGATCCTGCG CCCATGA
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| Protein sequence | MRALTYHGSH DVRVDQVDDP SIEQPDDIIL RVTATAICGS DLHLYRGKIP QVKQGDIFGH
EFMGVVEEAG PAVTAVRKGD RVIVPFVIAC GSCFFCQLDL HAACETTNPG RGAILNKKQI
PSGAALFGYS HLYGGVPGGQ AELVRVPKAN AGPFKVPDEL DDEQVLFLTD ILPTGYQAAI
NAGIKPGSSV AIYGAGPVGL MSAACARMLG AEQIFMVDHH DYRLQYAQQT YGVVPINFDV
VDDPAAAIIE QTAGHRGVDA VIDAVGFEAK GSLTETVLTA LKLEASSGVA LRQCIAAVRR
GGTVSVPGVY AGFIHGFLFG DAFDKGLTFK MGQTHVHPLL PTLLQHVLEG ELRPEIIISH
RLPLAEAAEG YRIFESRKEE CRKVILRP
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