Gene Pmen_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2290 
Symbol 
ID5108525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2524775 
End bp2525872 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content68% 
IMG OID640503532 
Producthypothetical protein 
Protein accessionYP_001187780 
Protein GI146307315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.302126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000035394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGGGT TTGACGGTCT GCTGCTGTTG CCCAGCGATG CTCACTCCAC GGCCCATGAA 
CGCAGCGTCC AGCGCCTGCT CGGCGAGAAG CTGGCGGCGC TGCTCGGCTG CCCCTTTCTC
GGCCCCAGTC AGCCGGGCGT GCACGGTCAG GGCAAATACT ACTTCCTGCC TTCGGACACC
CTGGTCGGCG ACGTGACGGC GCTGGGCATC GAAGGGCCGC AGGATTTCTT CGGCGGTCAG
GTCGAACATG CCTTCCAGGC CACCAAGGCC ATCAATCACC CGACCCTCGA CTCGCCCCGC
TACGTGCCGC AGGGCTGGTC ACGGCGTTTC GCCCGGCAGA TCGAAAGCAT CACCCTGCCC
GGCTTCACCG CCTTCGATCT GGACGATGCA CGGGAAGCCG GCCGGCGCCT TCTGCGCGAT
GGACCGGTGC GCCTCAAGCC GGTCGAGGGC TGCGGCGGAC GCGGCCAGCA GGTGCTGCGC
ACGGCCAGCG AGCTGGATGC GGCGCTGGCC GACATCGACC CGCAGCGGAT ACGCGAGCTG
GGCCTGGTGC TCGAGGAGGA CCTGCAGGAG CCCTACACCT ACAGCGTCGG CCAGATTCGC
GTGGCCGGCG TCACGCTCAG CTACTACGGC ATCCAGCAGC TGACCTCGGA CAACAGCGGT
TGCCAGGTCT ACGGCGGCTC CGAGCTGACC CTGGTACGAG GCGAATACCT GGCGCTGATG
ACGCTCGACC TGCCGCGCGC CGTGCGTCTG GCCGTGCAGC AGGCGCGCAT CTTCGAACTG
GCGGTGTTCG AGGCCTACCC CGCCGTTCGC GCCTCGCGGC GCAACTATGA CGTGGCCCAG
GGCCTGAACA CCGTCGGCCG CGCGCGCTGC GGCGTGCTGG AACAGTCCTG GCGCGTGGGT
GGTGCCAGCG CCGCGGAGAT CTTCGCGCTG GAGGCCTTCA TCGAGCAGCC GGACCTGCAA
AGCCTGCAGG CCTCGACCCA CGAACTGTAC GGCGACGTGC CGCCACCGCC GGGGGCGATC
TGTCTGTACC AGGGCGATGA GGACGGGCTT GGCTTGATCA GCAAGTACGT CAGGGTTACT
GAGCATGAGC GTGCATAG
 
Protein sequence
MMGFDGLLLL PSDAHSTAHE RSVQRLLGEK LAALLGCPFL GPSQPGVHGQ GKYYFLPSDT 
LVGDVTALGI EGPQDFFGGQ VEHAFQATKA INHPTLDSPR YVPQGWSRRF ARQIESITLP
GFTAFDLDDA REAGRRLLRD GPVRLKPVEG CGGRGQQVLR TASELDAALA DIDPQRIREL
GLVLEEDLQE PYTYSVGQIR VAGVTLSYYG IQQLTSDNSG CQVYGGSELT LVRGEYLALM
TLDLPRAVRL AVQQARIFEL AVFEAYPAVR ASRRNYDVAQ GLNTVGRARC GVLEQSWRVG
GASAAEIFAL EAFIEQPDLQ SLQASTHELY GDVPPPPGAI CLYQGDEDGL GLISKYVRVT
EHERA