Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2290 |
Symbol | |
ID | 5108525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2524775 |
End bp | 2525872 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503532 |
Product | hypothetical protein |
Protein accession | YP_001187780 |
Protein GI | 146307315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.302126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000035394 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGGGGT TTGACGGTCT GCTGCTGTTG CCCAGCGATG CTCACTCCAC GGCCCATGAA CGCAGCGTCC AGCGCCTGCT CGGCGAGAAG CTGGCGGCGC TGCTCGGCTG CCCCTTTCTC GGCCCCAGTC AGCCGGGCGT GCACGGTCAG GGCAAATACT ACTTCCTGCC TTCGGACACC CTGGTCGGCG ACGTGACGGC GCTGGGCATC GAAGGGCCGC AGGATTTCTT CGGCGGTCAG GTCGAACATG CCTTCCAGGC CACCAAGGCC ATCAATCACC CGACCCTCGA CTCGCCCCGC TACGTGCCGC AGGGCTGGTC ACGGCGTTTC GCCCGGCAGA TCGAAAGCAT CACCCTGCCC GGCTTCACCG CCTTCGATCT GGACGATGCA CGGGAAGCCG GCCGGCGCCT TCTGCGCGAT GGACCGGTGC GCCTCAAGCC GGTCGAGGGC TGCGGCGGAC GCGGCCAGCA GGTGCTGCGC ACGGCCAGCG AGCTGGATGC GGCGCTGGCC GACATCGACC CGCAGCGGAT ACGCGAGCTG GGCCTGGTGC TCGAGGAGGA CCTGCAGGAG CCCTACACCT ACAGCGTCGG CCAGATTCGC GTGGCCGGCG TCACGCTCAG CTACTACGGC ATCCAGCAGC TGACCTCGGA CAACAGCGGT TGCCAGGTCT ACGGCGGCTC CGAGCTGACC CTGGTACGAG GCGAATACCT GGCGCTGATG ACGCTCGACC TGCCGCGCGC CGTGCGTCTG GCCGTGCAGC AGGCGCGCAT CTTCGAACTG GCGGTGTTCG AGGCCTACCC CGCCGTTCGC GCCTCGCGGC GCAACTATGA CGTGGCCCAG GGCCTGAACA CCGTCGGCCG CGCGCGCTGC GGCGTGCTGG AACAGTCCTG GCGCGTGGGT GGTGCCAGCG CCGCGGAGAT CTTCGCGCTG GAGGCCTTCA TCGAGCAGCC GGACCTGCAA AGCCTGCAGG CCTCGACCCA CGAACTGTAC GGCGACGTGC CGCCACCGCC GGGGGCGATC TGTCTGTACC AGGGCGATGA GGACGGGCTT GGCTTGATCA GCAAGTACGT CAGGGTTACT GAGCATGAGC GTGCATAG
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Protein sequence | MMGFDGLLLL PSDAHSTAHE RSVQRLLGEK LAALLGCPFL GPSQPGVHGQ GKYYFLPSDT LVGDVTALGI EGPQDFFGGQ VEHAFQATKA INHPTLDSPR YVPQGWSRRF ARQIESITLP GFTAFDLDDA REAGRRLLRD GPVRLKPVEG CGGRGQQVLR TASELDAALA DIDPQRIREL GLVLEEDLQE PYTYSVGQIR VAGVTLSYYG IQQLTSDNSG CQVYGGSELT LVRGEYLALM TLDLPRAVRL AVQQARIFEL AVFEAYPAVR ASRRNYDVAQ GLNTVGRARC GVLEQSWRVG GASAAEIFAL EAFIEQPDLQ SLQASTHELY GDVPPPPGAI CLYQGDEDGL GLISKYVRVT EHERA
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