Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2284 |
Symbol | |
ID | 5108519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2518346 |
End bp | 2519134 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503526 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001187774 |
Protein GI | 146307309 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0656369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000754964 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAATACCA CCATCCCCAA TCCCGAGGTG ATCATCGATC GCGTCACCCC GGTCAAGCGC CTGGAGGTGC TGACCATCAA CACGCACAAG GGCTTCACTG CGCTCAACCG GCGCTTCATC CTGCCGGAGC TGCGCAGCGC GGTGCAGGCC ACCGGTGCCG ATCTGGTGTT CCTGCAGGAG GTGCTGGGCA GCCATGCCAT GCATGCCAAG CGCTTTCAGG ACTGGCCCAG CGTGCCGCAG TACGAGTTTC TCGCCGACAG CATGTGGCCG CAGTTCGCCT ATGGGCGCAA TGCGGTCTAC CCGGCCGGCG ATCATGGCAA CGCCCTGCTC TCGCGCTTTC CCATCCTCGA GTATCACAAC CTCGACGTCA CGGTCAGCGG CACCGAGCAG CGCGGTCTGC TGCACTGCCG CCTGGACGTG CCGGGACATG CCGAAGTGCA TGCGATCTGC GTGCACCTGG GCCTGCGCGA GCGGCATCGG CGGCAGCAGC TCGGCCTGCT GCTGGACCTG CTGGCGACCC TCGCCCCGGC AGCGCCGGTG ATAGTGGCCG GCGACTTCAA CGACTGGCGC CAGCGCGCCG ACGACCAGCT CGCCCCGCAT GCGCTGACAG AGGTGTTCAA GCACCATCAC GGCAAACCGG CGAGAAGCTT CCCCGCGCGC TGTCCGTTGC TGCGGCTGGA CCGCATCTAC GTGCGCAACG CCACCGCGCT CAAGCCGCAG GTGCTTTCGA CCCGACCCTG GTCGCACCTG TCCGACCATG CCCCGCTGGC TGCGGAGATC CATCTATGA
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Protein sequence | MNTTIPNPEV IIDRVTPVKR LEVLTINTHK GFTALNRRFI LPELRSAVQA TGADLVFLQE VLGSHAMHAK RFQDWPSVPQ YEFLADSMWP QFAYGRNAVY PAGDHGNALL SRFPILEYHN LDVTVSGTEQ RGLLHCRLDV PGHAEVHAIC VHLGLRERHR RQQLGLLLDL LATLAPAAPV IVAGDFNDWR QRADDQLAPH ALTEVFKHHH GKPARSFPAR CPLLRLDRIY VRNATALKPQ VLSTRPWSHL SDHAPLAAEI HL
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