| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2277 |
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| Symbol | glgA |
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| ID | 5108512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2506271 |
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| End bp | 2507797 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503519 |
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| Product | glycogen synthase |
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| Protein accession | YP_001187767 |
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| Protein GI | 146307302 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.100037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00503982 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAACCG CTGCAGCTAT CAACCCAAAC GCCAAGCTTC CGGCGGACAT TCAGCCTCCC
TTGCACATGG GCAGCCACCA CCCGCAGCGC AAGCGGGTGC TCTTCGTCAC TTCCGAATTC
AGCGACCTGA TCAAATGCGG TGGTCTCGGC GACGTGTCCG CCGCACTGCC GCGGGCGCTG
GCACCGCAAC ACGACATCCG CCTGCTGATC CCCGGCTATC GCCAGGTGGT GGAAAGCGGT
TGGCCGATCC GCATCGTCGG CCATGTCCGC GGGCTGGCGG CGTTGCCGCC GTGCCGCATC
GGACGCATGG ATCTGGCCGA TGGCCTGATC GTCTACGTGC TGCTCAACCC CGTGCTCTAC
GAACGCGACG GCACGCCCTA CGGCGATGCG CAGAGCCAGG ACTGGCCCGA CAACCACATC
CGTTTCGCTC GCCTGGGGCT GGCCGCGGCG GAAATCGCCA CCGGCGACGC CGGCATCCAG
TGGCGTCCGG ACCTGGTGCA CGCCAACGAC TGGCCGGCCT CCATGGCGCC GGCCTACATG
GCCTGGCGTG GCGCCACGGC ACCGGCCTTG CTGACCATTC ACAACCTGGC CTACCAGGGC
CTGTGCGACA TGGCCTGCAG CAGCGAGCTG GCGATCCCCG AGGAGGCCTG CGGCATCGAC
GGCATGGAGT TCCATGGCCG CCTGTCGTTT CTCAAGGCCG GTATCTCGTA TGCCCATCAC
GTCACCACGG TGAGCCGCAC CTATGCCCAG GAGATCACCA CCCCCGCGTT CGGCTGCGGG
CTCGAGGGCA TGCTGCAGGC CAAGGTGGCC GCAGGGCAGC TCAGCGGCAT CGTCAACGGC
ATCGACGAAA GCTGGAATCC GGAAACCGAC CCGCACCTGC TGCAGGGCTT CGCCCCGCGC
CAGTGGGAAG GCAAGCGCGC CAACGCCGCC TATGTCGAGC AATGGCTGGG GCTGGAGGCC
GAGGGGCCGC TGTTCGCGGT GATCTCCCGC CTGGTGCAGC AGAAAGGCAT CGACCTGACC
CTGGAGGTGG CCGAGCACAT CGTCGCCCAG GGCGGCCGCA TCGGTGCCAT CGGTCGCGGC
GAACCGGCTC TGGAGGCGGC CATGGCGCAA CTGGCGCAGC GCTATCCGGG ACGCATCGGC
GTGCACATCG GCTTCAACGA GACCGATGCG CGGCGTCTGT ACGCGGCCAG CGACTTCCTG
CTCATGCCGT CGCGTTTCGA GCCCTGCGGG CTGAGCCAGA TCTACGCCCA GCGCTTCGCC
TCGCTGCCGA TTGCCCGGCG CACCGGCGGG CTGGCCGACA CCATCGAGGA TGGCGTCAGC
GGCTTTCTCT TCGATGAACC GGATGCCGCC AGCTATCGAG CCGCCATCGA CCGGGCCCTG
CAGGTGTATC GCCACCGCGA GCTGTTCGAC GCCATGCGCT GCCACGCCAT GCACGCGCCG
CTGTACTGGC GGCAATCGGT ACGCCCCTAC GACCGCCTGT ATCAGCGCCT GCTGGCACGA
AGCAGCGCCA GGAGGGAGCA GCGCTGA
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| Protein sequence | MGTAAAINPN AKLPADIQPP LHMGSHHPQR KRVLFVTSEF SDLIKCGGLG DVSAALPRAL
APQHDIRLLI PGYRQVVESG WPIRIVGHVR GLAALPPCRI GRMDLADGLI VYVLLNPVLY
ERDGTPYGDA QSQDWPDNHI RFARLGLAAA EIATGDAGIQ WRPDLVHAND WPASMAPAYM
AWRGATAPAL LTIHNLAYQG LCDMACSSEL AIPEEACGID GMEFHGRLSF LKAGISYAHH
VTTVSRTYAQ EITTPAFGCG LEGMLQAKVA AGQLSGIVNG IDESWNPETD PHLLQGFAPR
QWEGKRANAA YVEQWLGLEA EGPLFAVISR LVQQKGIDLT LEVAEHIVAQ GGRIGAIGRG
EPALEAAMAQ LAQRYPGRIG VHIGFNETDA RRLYAASDFL LMPSRFEPCG LSQIYAQRFA
SLPIARRTGG LADTIEDGVS GFLFDEPDAA SYRAAIDRAL QVYRHRELFD AMRCHAMHAP
LYWRQSVRPY DRLYQRLLAR SSARREQR
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