Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2248 |
Symbol | |
ID | 5109192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2476632 |
End bp | 2477552 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640503491 |
Product | hypothetical protein |
Protein accession | YP_001187739 |
Protein GI | 146307274 |
COG category | [S] Function unknown |
COG ID | [COG4275] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0295306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGC CTACGGCAAA TGCCGCCGAG CGAATGCGCG CTTGGCGCAC GTTGAAAAGC GCTGGCGCTG CGGTACTACG CGATGGGGTT TATCTCCTGC CAGATGGCTC GGCTAGTCGT GAGGTACTGG AGTCCGTCGA GCGTGACGTA CTGGATAGCG GTGGCTCGGC GTCGCTCCTG CCGGTCACTG ATCCCCAGGG TGAGCGCTTC ATACCTCTCT TCGATCGCAG CGATGATTAC ACCAGGTTGC GCTCGGAGGT TGAGCCCCAA CTGGCCCAGT TGACTCCTGA GAATGCACTG GCGACTGCTC GCCAGGCCCG CAAGCTGCGC AAGTCGTTCG CTCAGATCCA GTCGATCGAC TTCTTTCCGG GCGAACCTTT GCAACAGACA GACGCGCTGC TGCGTGATCT CGAAGTGGCC ATCAACCGGG CGCTTTCCAA GGACGAGCCC ACCAGCCATG AGCAAGCCAT TGAGCAGCTC GATCCGCGGG ACTACGAAGG GCGAACCTGG GCGACTCGCC AGCGCCCCTG GGTAGACCGC CTGGCCAGCG CTTGGCTGAT CCGCCGCTTC ATCGATCCGG GTGCCAGCAT CCTCTGGCTT CCCTCTCCTG ATGCATGTCC TGCGGAAGCA CTTGGGTTCG ATTTCGATGG TGCCCGGTTC AGCCACGTCG GCAACAAGGT CACCTTCGAA ACCCTGCAGG CTAGCTTCGG GCTGGAGGCT CCAGGACTGC AGCGCGTAGG GGCACTGGTT CATTACCTGG ACGTGGGGGG CGCGCAACCC ACAGAAGCGA CGGGTGTAGA GCGCGTACTG GCTGGACTGC GAGCCAGCAT CCAGGACGAC GATCAGTTAT TGGCCGCAGC CTGCGCCATC TTCGATGGGC TGTTGGCCGC ATTCGGCAAG GAAGGACAAC GTGATGAGTG A
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Protein sequence | MALPTANAAE RMRAWRTLKS AGAAVLRDGV YLLPDGSASR EVLESVERDV LDSGGSASLL PVTDPQGERF IPLFDRSDDY TRLRSEVEPQ LAQLTPENAL ATARQARKLR KSFAQIQSID FFPGEPLQQT DALLRDLEVA INRALSKDEP TSHEQAIEQL DPRDYEGRTW ATRQRPWVDR LASAWLIRRF IDPGASILWL PSPDACPAEA LGFDFDGARF SHVGNKVTFE TLQASFGLEA PGLQRVGALV HYLDVGGAQP TEATGVERVL AGLRASIQDD DQLLAAACAI FDGLLAAFGK EGQRDE
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