Gene Pmen_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2247 
Symbol 
ID5109191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2475278 
End bp2476639 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content62% 
IMG OID640503490 
Productchromate transporter 
Protein accessionYP_001187738 
Protein GI146307273 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0538278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA CGGCCATGCA AGCGACGGAG CAAGACCAGG AAAAGGTAGA AAAAGTCGGC 
CTACTCGAGG CATTCCTGTT CTGGCTGAAA CTGGGATTCA TCAGCTTCGG TGGACCTGCC
GGGCAGATCT CGATCATGCA CCAGGAGCTG GTGGAGCGGC GGCGCTGGAT CTCGGAACGC
CGTTTCCTGC ATGCATTGAA CTACTGCATG CTCCTGCCAG GCCCGGAGGC TCAGCAACTG
GCCACCTACA TCGGCTGGCT CATGCATCGC ACCTGGGGTG GGGTGATCGC CGGCGCACTG
TTCGTGCTGC CCTCACTGTT CATCCTGATT GCCCTGTCCT GGGTCTACAT CGCCTTCGGC
GAAGTGCCCG TGGTGGCGGG ATTGTTCTAC GGTATCAAAC CCGCCGTCAC CGCCATCGTC
GTTCAGGCTG CTCACCGTAT CGGTTCACGC GCACTGAAGA ACAACTGGTT GTGGGCGATC
GCTGCCGCCT CCTTCGTGGC GATCTTCGCG CTCAACCTCC CGTTCCCGCT GATCGTCCTG
GGAGCAGCCA TGATCGGCTA CCTGGGCGGA CGCTATGCTC CCGACAAGTT CAGCATCGGT
GGCGGGCATG GCGCGTCCAA GCAGTCCTAT GGGCCAGCAT TGATCGACGA CGACACGCCA
CCACCGGCCC ATGCGCGCTT CCGCTGGTCG CGCTTGGCTC TGCTGGCCGC AGTAGGAGTC
GTGCTGTGGG CTTTGCCGAT GGGGCTGTTG ACTGCCCTCT ATGGTTGGGA CGGCACCCTG
ACCCAGATGG GCTGGTTCTT CACCAAGGCC GCTCTACTCA CCTTCGGCGG TGCCTATGCG
GTACTGCCGT ATGTCTATCA GGGCGCGGTA GGCCATTACG GTTGGCTGAC CCCTACCCAG
ATGATTGATG GCCTGGCATT GGGCGAAACC ACCCCCGGGC CACTGATCAT GGTCGTGGCC
TTCGTGGGCT TCGTTGGCGC GTATGTGCAT CAGGTCTTTG GGCCGGAACA GGCATTCCTT
GCCGGCGCTG TGGCAGCCAG CCTCGTAACT TGGTTTACCT TCTTGCCCTC GTTCCTGTTC
ATCCTCGTCG GCGGGCCGCT GGTGGAGTCT ACCCACAACG AATTGAAGTT TACGGCACCA
CTGACCGGCA TCACTGCCGC GGTGGTTGGC GTCATCCTCA ACCTAGCGCT GTTCTTCGGT
TATCACGTGC TGTGGCCTGA GGGCTTTGCT GGCAGCTTCG ATTGGCCCTC CGCGCTGATC
ACTGTCGGTG CCGCAGTGGC GCTGTTCCGC TTCAAGCGTG GAGTCATCCA GGTGTTGCTG
GGCTGCGCGC TGGTGGGCTT GGCTATCCAC CTGCTGCGTT AG
 
Protein sequence
MSETAMQATE QDQEKVEKVG LLEAFLFWLK LGFISFGGPA GQISIMHQEL VERRRWISER 
RFLHALNYCM LLPGPEAQQL ATYIGWLMHR TWGGVIAGAL FVLPSLFILI ALSWVYIAFG
EVPVVAGLFY GIKPAVTAIV VQAAHRIGSR ALKNNWLWAI AAASFVAIFA LNLPFPLIVL
GAAMIGYLGG RYAPDKFSIG GGHGASKQSY GPALIDDDTP PPAHARFRWS RLALLAAVGV
VLWALPMGLL TALYGWDGTL TQMGWFFTKA ALLTFGGAYA VLPYVYQGAV GHYGWLTPTQ
MIDGLALGET TPGPLIMVVA FVGFVGAYVH QVFGPEQAFL AGAVAASLVT WFTFLPSFLF
ILVGGPLVES THNELKFTAP LTGITAAVVG VILNLALFFG YHVLWPEGFA GSFDWPSALI
TVGAAVALFR FKRGVIQVLL GCALVGLAIH LLR