Gene Pmen_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2246 
Symbol 
ID5109190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2474945 
End bp2475268 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content61% 
IMG OID640503489 
Productrhodanese domain-containing protein 
Protein accessionYP_001187737 
Protein GI146307272 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00449361 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCA TATCGATTCA CGAGTTCGCT GAGTGGCAGG CTGCTGGTCG CAGCTTCGAG 
CTGCTCGATG TGCGCCGAGC CATCGTGCGC AACGCCGACG GGGCACAGAT CGCCAACGCG
AAATGGCAGG ACCCCGAACT GCTTTTTTCC TGGAAGGATC AGGTGCCACG GGATCGCCCC
GTGATTCTTT ACTGCGCGCA TGGGCATGAA ATCAGCCAAG GGTGTGCCGC TACTCTCTGG
GCGATGGGAC TGGATGCGCG GTATCTCGTC GACGGCTTTG CAGGGTGGCG TGAAGCCAAG
CAGCCGGTGT GCGATTTGGT CTAG
 
Protein sequence
MGRISIHEFA EWQAAGRSFE LLDVRRAIVR NADGAQIANA KWQDPELLFS WKDQVPRDRP 
VILYCAHGHE ISQGCAATLW AMGLDARYLV DGFAGWREAK QPVCDLV