| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2243 |
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| Symbol | |
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| ID | 5109187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2472394 |
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| End bp | 2473521 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503486 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001187734 |
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| Protein GI | 146307269 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0260591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGCT TTGCCGAATT GCTGCAGCAG GGCGCGTCTC ACGCCTGGCT GTACTTCCCC
AGCGCCATCC TCCTAGGGGC ATTGCATGGC CTGGAGCCAG GCCACTCGAA GACCATGATG
GCGGCCTTCA TCGTAGCCAT CCGCGGCACC GTGAAGCAGG CGGTCTTGCT GGGGCTGGCG
GCAACCATTT CGCACACCGC AGTGGTCTGG CTGGTGGCCA TGGGCGGCAT GTATCTGGGC
CAGAACCTGA ATGCGGAAAC GACAGAGCCC TATTTCCAGC TCGCTTCCGC CGCGATCATC
ATCACCATCG CGCTGTGGAT GCTTTGGCGC ACCTGGCGTG GCGAGCAGAT GTGGCGTTTC
GAAGAAGGTG ATCACGCGCA TGATCACCAC CACGATGAGA CCCGCCGAAT CGATACCGGA
CACGGGCGTA TCGAACTCTC GATCTTCGAG GAAGGGGTTC CCCCGCGTTG GCGCTTGCGC
ACTCTGAGTG GTCACTCTTG GCCAGCAGAA GACGTGAATC TGTCGACGAC GCGTCCTGAC
GGGACAGCTC AGCTGTTCCG CTTTGTGCAT CGCGGCGAAT ACCTGGAGTC GGTCGCAGAA
ATTCCCGAGC CTCATCAGTT CACCGCGCGT CTAAGCCTTG GTCACGCGGG CCATTCGCAC
GACTATGACC TCGATTTCCA TGAGCACGAC CACGGCCACG GCCACGACCA TTCCGATCTA
CAGGGCCTGG AGCTGTCGCT GGAGGGATAC CAGGATGCCC ATGAGCGAGC CCACGCCAAC
GACATCCGCA ACCGCTTCAA TAACCGCAAC GTCACTACAG GCCAGATCAT CCTGTTCGGC
CTGACCGGAG GACTGATCCC CTGTCCTGCC GCGATTACGG TGTTGTTGCT ATGCCTGCAG
GTGAAGGAAG TCGCACTCGG GGCTGTTCTG GTGCTGTGCT TTAGTGTCGG CCTGGCGTTG
ACCCTGGTGT CCGTCGGTGC AGCTGCTGCG GTGGGCGCTC GCCAGGCCTC CAACCGGTGG
CCATGGCTGG GAGCGGTCGC GCGTCGCGCG CCCTACCTCT CGAGCGTGCT CATCATTGGT
GTCGGTATCT ATGTCGGCGT TCATGGCTGG ATCGGTCTGA CCGCCTAA
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| Protein sequence | MSSFAELLQQ GASHAWLYFP SAILLGALHG LEPGHSKTMM AAFIVAIRGT VKQAVLLGLA
ATISHTAVVW LVAMGGMYLG QNLNAETTEP YFQLASAAII ITIALWMLWR TWRGEQMWRF
EEGDHAHDHH HDETRRIDTG HGRIELSIFE EGVPPRWRLR TLSGHSWPAE DVNLSTTRPD
GTAQLFRFVH RGEYLESVAE IPEPHQFTAR LSLGHAGHSH DYDLDFHEHD HGHGHDHSDL
QGLELSLEGY QDAHERAHAN DIRNRFNNRN VTTGQIILFG LTGGLIPCPA AITVLLLCLQ
VKEVALGAVL VLCFSVGLAL TLVSVGAAAA VGARQASNRW PWLGAVARRA PYLSSVLIIG
VGIYVGVHGW IGLTA
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