Gene Pmen_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2242 
Symbol 
ID5109186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2472092 
End bp2472385 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content59% 
IMG OID640503485 
Producthypothetical protein 
Protein accessionYP_001187733 
Protein GI146307268 
COG category[S] Function unknown 
COG ID[COG1937] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00107206 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC ACGAACACAG CCATGGCCAC CGACACCAAA GCCACAGCGA TGTCATGAAG 
CGCCTGAAGC GCGCCGAGGG CCATCTGCGC AGCATCATCA CCATGATCGA GGATGGCCGT
GAGTGCGTGG ATATCGCGCA GCAGCTGCAT GCCGTGGAGA AGGCCGTATG CCAGGCCAAG
CGCACCCTGA TTCAAGATCA CATCGATCAC TGCCTGGAGC ACACGATGGA CGCCCTCGCT
ACTGGCGAGC GCACCTCCCT TGAAGACTTC AAGCAGATCA CGAAGTACCT GTAG
 
Protein sequence
MSDHEHSHGH RHQSHSDVMK RLKRAEGHLR SIITMIEDGR ECVDIAQQLH AVEKAVCQAK 
RTLIQDHIDH CLEHTMDALA TGERTSLEDF KQITKYL