Gene Pmen_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2232 
Symbol 
ID5109176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2464406 
End bp2464963 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content58% 
IMG OID640503475 
Producthypothetical protein 
Protein accessionYP_001187723 
Protein GI146307258 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.53865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TACCCCTTAA ACTGCTGATC AGCACTCTGT TCATCAGCAC CACCTTTCCG 
GCATTTGCCG AGGTCGGCGG CAGTAGCAAT GGCATTGGGC AGCAGGCCCA GGCGACGCCA
GCGACTCGTA CCATCTTGGT AAAGATGGAC GACATCAACT ACAGCCAGAA AACGATCGAT
GTGAAGCCAG GTGAAACCGT GCGCTTCGTT CTGAAGAACG AGGGCGCGTT GATGCACGAG
TTCAACATCG GGCAGGCAGC GTCCCAGCTG GAGCACCAGC GCAAGATGGC GTCCTTGTTC
AAGGACGGCA CACTGACCCC GACCGGCATG GCCGAGCGCA TTGTCTGGCA TGAGCGTTAT
GGCATGGGAG ACTCCAACCC TCCAGGCTAT CCGGAAGTCA TCAAAGCCAA GCATGACGAC
CCGAACGCGG TTCTCGTCGA GCCCGGCACA ACCAAAGAGT TCGTGTGGAC CTTCCCTAAG
GCGGGCAGTT TGAGCTTCGC CTGTACATTG CCTGGGCATT ACCAGGCGGG GATGGTCGGT
GAGTTTGCTC TGCGTTAG
 
Protein sequence
MKRLPLKLLI STLFISTTFP AFAEVGGSSN GIGQQAQATP ATRTILVKMD DINYSQKTID 
VKPGETVRFV LKNEGALMHE FNIGQAASQL EHQRKMASLF KDGTLTPTGM AERIVWHERY
GMGDSNPPGY PEVIKAKHDD PNAVLVEPGT TKEFVWTFPK AGSLSFACTL PGHYQAGMVG
EFALR