Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2229 |
Symbol | |
ID | 5109173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2461028 |
End bp | 2463391 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640503472 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_001187720 |
Protein GI | 146307255 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG2217] Cation transport ATPase [COG3350] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.76869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGA CCTCCTGCCA TCATGACCAG GATCATTCAC ATAACTCGCA CGCCCACTCC GAGAGCCAGC GCGACCCGGT GTGTGGCATG GAGGTCAAAC CTGATGGCCC TTATCGCGAG AGCTTTGAAG GGAAGGCCTA TCATTTCTGC AGTGCGAAGT GCCTAGAGAA ATTCCAAGCA GATCCTCATC AGTACATGAG CCATCAGTCT CATGGGGAGC ATCACCAGCA CGCGACTCCA GCACCCACAT CGACACCTGT AGGTGCTGAA TACACCTGCC CGATGCATCC AGAAATCCGT CAACCGGCTC CCGGAAACTG CCCGATCTGC GGGATGACGC TGGAACCTGT CATCCCGGAG CTGGAAGAGG AGGAAAATCC AGAGCTGAAG GACTTCTCGC TGCGGTTCTG GTGGACCCTA CCGTTGACCG TCATCGTGAC CGTATTGGCG ATGGCCGGCC ATTCCTTGCA ACTGTTTCAT GGCACGACCC AGAACTGGGT CGAGCTGGCT CTGGCGACGC CCGTGACGCT ATGGGGTGGC TGGGTATTCT TCACCCGCGG CATTGACTCC ATCCGCCACC GCAGCCCCAA CATGTGGACC CTGATCGGTT TGGGAACGGC CGCTGCCTAC CTCTACAGCG TGGCCGCTAC CTTGGTTCCG CAGTGGTTTC CGGCGGCTTT TGCCCAGGAC GGACGTATCG GCGTCTATTT TGAAGCAGCC GCGGTGATTA TCTCACTCAC GCTGTTGGGC CAAATGCTCG AACTCAAGGC CCGCTCGCAG ACTTCGGCAG CCATCAAGTC ACTGCTGAGG CTGGCACCAA AGACTGCGCG TCGCATCAAG CCCGATGGCC AGGAAGAAGA TATTCCGCTG ACACATGTCC ATCAGGGCGA CCACCTACGT GTCCGGCCGG GAGAGAAAGT CCCGGTGGAC GGTACGGTTC TAGAGGGGGA GAGCGCCGTC GACGAGTCGA TGCTTACCGG AGAACCGTTA CCCGTGACCA AGCGGGTAGG GGATGCCCTT ATCGGTGCCA CCCTGAACAC CCACGGCAGC CTGGTGATGG AGGCGCAGAA GGTCGGTGCC GAGACCATGC TGTCGCAGAT CGTTCAGATG GTGGCCAGAG CCCAACGTTC CAAGGCCCCC ATGCAGCGTA TGGCTGATGC GGTGGCAGGG TATTTCGTGG TCGGGGTGAT CCTGATCGCG ATTCTGACCT TCTTCGGCTG GGGGCTATTA GGGCCGGAAT CAGGCTGGGT ATTTGGCCTG ATCAATGCGG TGGCGGTGCT AATCATTGCG TGTCCCTGCG CTCTGGGTCT GGCAACCCCG ATGTCCGTCA TGGTTGCGAC TGGCAAGGCC GCTAGCAGCG GTGTGTTGTT CCGCGATGCC AGCGCCATCG AAAATCTATG CAAGATCGAC ACGCTCATCG TCGACAAGAC TGGAACCCTG ACTGAGGGGC GTCCCGTATT TCATAGTGCG GAAGGGACAG GCGGTTACGA CTCCAATGAA GTGCTGCGCC TGGCTGCTAG TCTCGACCAG GGTAGTGAGC ACCCGCTGGC TCATGCCATC GTCGATCATG CGCGCGGTCA GGGCATTGCA CTGGTCAAAC CGGACACTTT CGAATCTGGC TCGGGTATTG GTGTGCGCGG CCAGGTCGAT GACCATCAGC TGCAGCTCGG CAACACCGCA CTGATGGACG AGGCGGGCGT CGATATTACC CCGCTGCGCA ATCGCGCCGA GCAACTGCGT CTGGAAGGCA TCAGCATCAT CTATTTGGCC GTTGATGGTC GCCTGGCGGG ACTCCTGGCC GTTTCCGATC CGATCAAGCC TACTTCTCAA CAGGCTGTCT CCAAGCTTCA AAGCGAAGAC GTAAAGGTCA TCATGGCCAC TGGTGATGGC CTCACCACAG CAAGAGCCGT GGCGAAGCAG CTCGGAATCG AGGAAGTGCA TGGTGAGGTC AAACCGCAGG ATAAGGAGAA ACTGGTCGCC GATTTGCAGG GCTATGGCCG TCGTGTCGCC ATGGCGGGTG ACGGCATCAA CGATGCGCCC GCCCTGGCCA GGTCTGACGT AGGTATCGCC ATGGGCACCG GTACCGATGT GGCGATGAAC AGCGCCCAAG TGACGCTGGT CAAGGGAGAT CTGATGGGCA TCCTGCGAGC GCGCACCCTG TCAGTGGCAA CCGTGAAAAA CATGAGGCAG AACCTCGCCT TTGCGTTCCT CTACAACGCG ATGGGAATCC CGCTAGCAGC GGGGCTGCTG TACCCGCTGA CGGGGCATCT TCTGTCGCCC TTGATTGCTG CGCTGGCGAT GAGTGTCAGC TCGGCGTCGG TGGTCTTCAA TGCTCTGAGA TTGAAATCAA CGGACATCGG CTAG
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Protein sequence | MQKTSCHHDQ DHSHNSHAHS ESQRDPVCGM EVKPDGPYRE SFEGKAYHFC SAKCLEKFQA DPHQYMSHQS HGEHHQHATP APTSTPVGAE YTCPMHPEIR QPAPGNCPIC GMTLEPVIPE LEEEENPELK DFSLRFWWTL PLTVIVTVLA MAGHSLQLFH GTTQNWVELA LATPVTLWGG WVFFTRGIDS IRHRSPNMWT LIGLGTAAAY LYSVAATLVP QWFPAAFAQD GRIGVYFEAA AVIISLTLLG QMLELKARSQ TSAAIKSLLR LAPKTARRIK PDGQEEDIPL THVHQGDHLR VRPGEKVPVD GTVLEGESAV DESMLTGEPL PVTKRVGDAL IGATLNTHGS LVMEAQKVGA ETMLSQIVQM VARAQRSKAP MQRMADAVAG YFVVGVILIA ILTFFGWGLL GPESGWVFGL INAVAVLIIA CPCALGLATP MSVMVATGKA ASSGVLFRDA SAIENLCKID TLIVDKTGTL TEGRPVFHSA EGTGGYDSNE VLRLAASLDQ GSEHPLAHAI VDHARGQGIA LVKPDTFESG SGIGVRGQVD DHQLQLGNTA LMDEAGVDIT PLRNRAEQLR LEGISIIYLA VDGRLAGLLA VSDPIKPTSQ QAVSKLQSED VKVIMATGDG LTTARAVAKQ LGIEEVHGEV KPQDKEKLVA DLQGYGRRVA MAGDGINDAP ALARSDVGIA MGTGTDVAMN SAQVTLVKGD LMGILRARTL SVATVKNMRQ NLAFAFLYNA MGIPLAAGLL YPLTGHLLSP LIAALAMSVS SASVVFNALR LKSTDIG
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