| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2229 |
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| Symbol | |
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| ID | 5109173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2461028 |
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| End bp | 2463391 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640503472 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001187720 |
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| Protein GI | 146307255 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.76869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA CCTCCTGCCA TCATGACCAG GATCATTCAC ATAACTCGCA CGCCCACTCC
GAGAGCCAGC GCGACCCGGT GTGTGGCATG GAGGTCAAAC CTGATGGCCC TTATCGCGAG
AGCTTTGAAG GGAAGGCCTA TCATTTCTGC AGTGCGAAGT GCCTAGAGAA ATTCCAAGCA
GATCCTCATC AGTACATGAG CCATCAGTCT CATGGGGAGC ATCACCAGCA CGCGACTCCA
GCACCCACAT CGACACCTGT AGGTGCTGAA TACACCTGCC CGATGCATCC AGAAATCCGT
CAACCGGCTC CCGGAAACTG CCCGATCTGC GGGATGACGC TGGAACCTGT CATCCCGGAG
CTGGAAGAGG AGGAAAATCC AGAGCTGAAG GACTTCTCGC TGCGGTTCTG GTGGACCCTA
CCGTTGACCG TCATCGTGAC CGTATTGGCG ATGGCCGGCC ATTCCTTGCA ACTGTTTCAT
GGCACGACCC AGAACTGGGT CGAGCTGGCT CTGGCGACGC CCGTGACGCT ATGGGGTGGC
TGGGTATTCT TCACCCGCGG CATTGACTCC ATCCGCCACC GCAGCCCCAA CATGTGGACC
CTGATCGGTT TGGGAACGGC CGCTGCCTAC CTCTACAGCG TGGCCGCTAC CTTGGTTCCG
CAGTGGTTTC CGGCGGCTTT TGCCCAGGAC GGACGTATCG GCGTCTATTT TGAAGCAGCC
GCGGTGATTA TCTCACTCAC GCTGTTGGGC CAAATGCTCG AACTCAAGGC CCGCTCGCAG
ACTTCGGCAG CCATCAAGTC ACTGCTGAGG CTGGCACCAA AGACTGCGCG TCGCATCAAG
CCCGATGGCC AGGAAGAAGA TATTCCGCTG ACACATGTCC ATCAGGGCGA CCACCTACGT
GTCCGGCCGG GAGAGAAAGT CCCGGTGGAC GGTACGGTTC TAGAGGGGGA GAGCGCCGTC
GACGAGTCGA TGCTTACCGG AGAACCGTTA CCCGTGACCA AGCGGGTAGG GGATGCCCTT
ATCGGTGCCA CCCTGAACAC CCACGGCAGC CTGGTGATGG AGGCGCAGAA GGTCGGTGCC
GAGACCATGC TGTCGCAGAT CGTTCAGATG GTGGCCAGAG CCCAACGTTC CAAGGCCCCC
ATGCAGCGTA TGGCTGATGC GGTGGCAGGG TATTTCGTGG TCGGGGTGAT CCTGATCGCG
ATTCTGACCT TCTTCGGCTG GGGGCTATTA GGGCCGGAAT CAGGCTGGGT ATTTGGCCTG
ATCAATGCGG TGGCGGTGCT AATCATTGCG TGTCCCTGCG CTCTGGGTCT GGCAACCCCG
ATGTCCGTCA TGGTTGCGAC TGGCAAGGCC GCTAGCAGCG GTGTGTTGTT CCGCGATGCC
AGCGCCATCG AAAATCTATG CAAGATCGAC ACGCTCATCG TCGACAAGAC TGGAACCCTG
ACTGAGGGGC GTCCCGTATT TCATAGTGCG GAAGGGACAG GCGGTTACGA CTCCAATGAA
GTGCTGCGCC TGGCTGCTAG TCTCGACCAG GGTAGTGAGC ACCCGCTGGC TCATGCCATC
GTCGATCATG CGCGCGGTCA GGGCATTGCA CTGGTCAAAC CGGACACTTT CGAATCTGGC
TCGGGTATTG GTGTGCGCGG CCAGGTCGAT GACCATCAGC TGCAGCTCGG CAACACCGCA
CTGATGGACG AGGCGGGCGT CGATATTACC CCGCTGCGCA ATCGCGCCGA GCAACTGCGT
CTGGAAGGCA TCAGCATCAT CTATTTGGCC GTTGATGGTC GCCTGGCGGG ACTCCTGGCC
GTTTCCGATC CGATCAAGCC TACTTCTCAA CAGGCTGTCT CCAAGCTTCA AAGCGAAGAC
GTAAAGGTCA TCATGGCCAC TGGTGATGGC CTCACCACAG CAAGAGCCGT GGCGAAGCAG
CTCGGAATCG AGGAAGTGCA TGGTGAGGTC AAACCGCAGG ATAAGGAGAA ACTGGTCGCC
GATTTGCAGG GCTATGGCCG TCGTGTCGCC ATGGCGGGTG ACGGCATCAA CGATGCGCCC
GCCCTGGCCA GGTCTGACGT AGGTATCGCC ATGGGCACCG GTACCGATGT GGCGATGAAC
AGCGCCCAAG TGACGCTGGT CAAGGGAGAT CTGATGGGCA TCCTGCGAGC GCGCACCCTG
TCAGTGGCAA CCGTGAAAAA CATGAGGCAG AACCTCGCCT TTGCGTTCCT CTACAACGCG
ATGGGAATCC CGCTAGCAGC GGGGCTGCTG TACCCGCTGA CGGGGCATCT TCTGTCGCCC
TTGATTGCTG CGCTGGCGAT GAGTGTCAGC TCGGCGTCGG TGGTCTTCAA TGCTCTGAGA
TTGAAATCAA CGGACATCGG CTAG
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| Protein sequence | MQKTSCHHDQ DHSHNSHAHS ESQRDPVCGM EVKPDGPYRE SFEGKAYHFC SAKCLEKFQA
DPHQYMSHQS HGEHHQHATP APTSTPVGAE YTCPMHPEIR QPAPGNCPIC GMTLEPVIPE
LEEEENPELK DFSLRFWWTL PLTVIVTVLA MAGHSLQLFH GTTQNWVELA LATPVTLWGG
WVFFTRGIDS IRHRSPNMWT LIGLGTAAAY LYSVAATLVP QWFPAAFAQD GRIGVYFEAA
AVIISLTLLG QMLELKARSQ TSAAIKSLLR LAPKTARRIK PDGQEEDIPL THVHQGDHLR
VRPGEKVPVD GTVLEGESAV DESMLTGEPL PVTKRVGDAL IGATLNTHGS LVMEAQKVGA
ETMLSQIVQM VARAQRSKAP MQRMADAVAG YFVVGVILIA ILTFFGWGLL GPESGWVFGL
INAVAVLIIA CPCALGLATP MSVMVATGKA ASSGVLFRDA SAIENLCKID TLIVDKTGTL
TEGRPVFHSA EGTGGYDSNE VLRLAASLDQ GSEHPLAHAI VDHARGQGIA LVKPDTFESG
SGIGVRGQVD DHQLQLGNTA LMDEAGVDIT PLRNRAEQLR LEGISIIYLA VDGRLAGLLA
VSDPIKPTSQ QAVSKLQSED VKVIMATGDG LTTARAVAKQ LGIEEVHGEV KPQDKEKLVA
DLQGYGRRVA MAGDGINDAP ALARSDVGIA MGTGTDVAMN SAQVTLVKGD LMGILRARTL
SVATVKNMRQ NLAFAFLYNA MGIPLAAGLL YPLTGHLLSP LIAALAMSVS SASVVFNALR
LKSTDIG
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