Gene Pmen_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2220 
Symbol 
ID5109165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2455674 
End bp2455880 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content60% 
IMG OID640503464 
Producthypothetical protein 
Protein accessionYP_001187712 
Protein GI146307247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.419146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA TCAAAACCCT GTTTGTAGTT GCTGCCCTGA GTGCTTCCAC TCTGGCGATG 
GCCGAAGGCG GTGCCGATCG CACGTTTGCA CGCATGGAGC AGGCCCGTCA GGTCTCGCTG
GAAGCGTATC AGCTGGCCAA GCAGCAGAAG GATGGAGCTC CCGTCGCCGG CAGCCAAGCC
AAACAGGCGG AACACGCCAA CTGCTGA
 
Protein sequence
MKSIKTLFVV AALSASTLAM AEGGADRTFA RMEQARQVSL EAYQLAKQQK DGAPVAGSQA 
KQAEHANC