| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2219 |
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| Symbol | |
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| ID | 5109164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2453671 |
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| End bp | 2455485 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640503463 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001187711 |
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| Protein GI | 146307246 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00411811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA AAACCACAAG ACGTACTTTC GTCAAAGGCC TCGCCGCCGC CGGTATTCTC
GGCGGCATGG GCATGTGGCG CACGCCGGTC TGGGCGGTAA CCAGCCCAGG TCAGCCGAAC
GTGCTGAGCG GTAACGATTT CGACCTGTTT ATCGGAGAGA CTCCGGTAAA CATCACCGGC
GCAGCGCGTA CCGCCATGAC GATCAATGGC TCGCTGCCAG GCCCAATCCT GCGCTGGCGG
GAGGGCGAGA CCGTGACGTT GCGCGTACGC AACCGCCTCA AGGAGGACAC GTCCATTCAC
TGGCACGGCA TTATCCTGCC GGCGAACATG GATGGCGTTC CGGGCCTGAG CTTCCATGGC
ATCGCCCCCG ACGGCATGTA TGAGTACAAG TTCAAGGTCA ACCAGAACGG CACCTACTGG
TATCACAGCC ACTCGGGGCT CCAGGAGCAA GTCGGCGTAT ACGGCGCGCT GGTCATCGAC
GCCAAGGAAC CCGAGCCCTT CAGTTACGAC CGTGATTATG TCGTGCTGCT GAGCGACTGG
ACCGATGAAA ATCCAGCGCG GGTACTGGCC AAGCTCAAAA AGCAGTCGGA CTACTACAAC
TACCACAAGC GCACCGTTGG TGATTTCATC AATGACGTGA GCGAGATGGG GTGGTCCGCT
GCGGTAGCCG ATCGCAAGAT GTGGGCCGAG ATGAAGATGA GCCCGACGGA TCTCGCTGAC
GTCAGTGGCT ACACCTACAC CTACCTGATG AATGGCCAGG CACCTGATGG CAACTGGACC
GGCATATTCA AACCGGGCGA AAAGATCCGC CTGCGCTTCA TCAACGCCTC GGCGATGACC
TATTTCGATG TGCGCATCCC AGGCCTGAAG ATGACTGTGG TTGCGGCCGA TGGTCTGCAC
GTCAAACCGG TCAGCGTCGA CGAGTTCCGT ATCGCCGTGG CCGAGACCTA CGACGTGATC
ATCGAACCAG ACAGCGAACA GGCCTATACC GTGTTTGCCC AATCCATGGA CCGCACTGGC
TATGCGCGCG GCACCCTTGC GGTACAGGAA GGGTTGAGTG CACCGGTACC AAGCCCTGAC
CCGCGCCCAC TGATTGCCAT GGGTGACATG GGCATGGACC ACGGCAGCAT GGGCGGCATG
GATCATGGGA GCATGGCCGG GATGGATCAC GGCAGTATGT CGGGCATGGA TCATGGGAGC
ATGCAGGGTG GCATGGCCGG CATGGATCAC AGCCAGATGG CGGGAATGGA TCATTCGGGC
ATGGCAGGCA TGGCAGGCAT GGCAGGTGCC ATGCAGGCAC ACCCAGCCTC AGAGACCAAC
AACCCGCTGG TCGATATGCA AACCATGACA CCAACGCATA AGTTGGACGA CCCAGGTATT
GGTTTGCGAG ACAACGGCCG ACGCGTCCTC ACGTACTCTG ACCTGCGCAG CACCTTCCCT
GATCCGGACG GGCGTGAGCC AAGTCGCACC ATCGAGCTGC ACCTCACCGG GCATATGGAG
AAATTCTCCT GGTCCTTCGA TGGAATCAAG TTCTCTGACG CCGAGCCTCT GCGCCTCAAG
TACGGCGAGC GTGTTCGCAT CACGCTGGTC AACGACACCA TGATGACTCA CCCGATCCAT
CTTCATGGCA TGTGGAGTGA TCTGGAGGAT GCGAACGGCA ATTTCCTGGT GCGTAAACAC
ACCATCGACA TGCCGCCAGG TTCCAAGCGC AGCTATCGGG TGACCGCCGA TGCGTTGGGG
CGTTGGGCCT ATCACTGCCA CCTGTTGCTC CACATGGAAA CGGGCATGTT CCGTGAAGTC
CGTGTGGATG AGTAA
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| Protein sequence | MQSKTTRRTF VKGLAAAGIL GGMGMWRTPV WAVTSPGQPN VLSGNDFDLF IGETPVNITG
AARTAMTING SLPGPILRWR EGETVTLRVR NRLKEDTSIH WHGIILPANM DGVPGLSFHG
IAPDGMYEYK FKVNQNGTYW YHSHSGLQEQ VGVYGALVID AKEPEPFSYD RDYVVLLSDW
TDENPARVLA KLKKQSDYYN YHKRTVGDFI NDVSEMGWSA AVADRKMWAE MKMSPTDLAD
VSGYTYTYLM NGQAPDGNWT GIFKPGEKIR LRFINASAMT YFDVRIPGLK MTVVAADGLH
VKPVSVDEFR IAVAETYDVI IEPDSEQAYT VFAQSMDRTG YARGTLAVQE GLSAPVPSPD
PRPLIAMGDM GMDHGSMGGM DHGSMAGMDH GSMSGMDHGS MQGGMAGMDH SQMAGMDHSG
MAGMAGMAGA MQAHPASETN NPLVDMQTMT PTHKLDDPGI GLRDNGRRVL TYSDLRSTFP
DPDGREPSRT IELHLTGHME KFSWSFDGIK FSDAEPLRLK YGERVRITLV NDTMMTHPIH
LHGMWSDLED ANGNFLVRKH TIDMPPGSKR SYRVTADALG RWAYHCHLLL HMETGMFREV
RVDE
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