| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2210 |
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| Symbol | |
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| ID | 5109155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2442981 |
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| End bp | 2444243 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503454 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001187702 |
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| Protein GI | 146307237 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.119249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0896895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTT TCCTTTTCCC ACGCCGTGGC TATCTCGGTG TGTTAGCTGC CGCATTCTGG
GCAGTTCCCT GGGTTGCTGC ACAGGCGCAG CCCCTAACCT TCGAACGAGC GCAGGCGCTC
GCCGAACAGC GCGCACCTGA GAACCTGGCA CGACAAGCAC AGGTCGCTTC GGCACAGCAG
GCCGTAGTTC CCGCAGACGC CCTGCCCGAT CCCAAGCTGA TTCTCGGCAT CGATAATCTG
CCCATCGAAG GGCCTGATCG TTACACCCTG AATCGTGACT CAATGACCAT GCGCCGCATT
GGGCTCATGC AAGAGGTTCC CAATGGCGAC AAACGCCAGG CCCGCCGCCA GTTGGCCGAG
GCCTCCGTTG TCCGGGCCGA GGCCGAGCAG CGCGCCATGC AGCTTGAGGT CAAACGCCAG
ACGGCATTGA GCTGGTTGGA TGTGTACTAC GCCGAGCACA GTGTTGGCCT CTTCGATCAA
CTGGACCGCC AGATCGAGCT GCTCCGCTCG ACGGTGCAAT CGCTGATCGC CGGTGGCAGC
GCTCAGCCTG GTGAACTGCT GCAGGCCGAC CAGGAGGCTT TGGCATTGCA GGATCGGCGG
GATGAGCTGA GTCGCGACGT GGCGATAGCT CGGGCCAAGC TGCGCCGCTG GATAGGCAAC
GAAGCCGATC AACTTCTGGC GGGAGATGTG CCCAGCCTAA GTTTGGATGC CCTCCACCTG
CAGCACCGTT TGACTCAGCA TCCCGACTTG CGTGCCGCGT CTGCCCGGGT TGGCGAGGCC
AGCGCAGAGT TGAATGAGGC TGTAGCCGAG AAGACACCTG ACTGGGGCGT AGAGTTTGCC
TACAACAACC GCGACAACCA GTTCGGCGAC ATGGTGATGG TACAGTTCAC CTTCGACCTG
CCGTTGTTCG TCGGCACACG CCAGGGCCCC AAGATCAACG CCAAGCAACA GAGCGTGTCG
CAGATGGAAG CCGAGCAGGA AGTGCTGCTG CGCGCCCATC AGGCTGAGTT GGAAAGCGGC
CTTGCCGAGT TGGAGCAACT ACGCAGAGCT CTGGCGCGTA CCGAGAAAAC CTTGATCCCT
CTGGCGAGCA AACGTGCCGA TCTCGAACTG GCCGCCTATC AGGCCGGCAA CAGTCAGCTG
GCATCCGTCA TCACCGCCCA GCGCGAGCTG ATCGAGGCTC AGCTGCGACA GATCGGACAG
CAGCGCAAGC TGAGCCAGCT CTCCGCGAGC TTGTACTACG CCTATGTGGA GGGCCTGCAA
TGA
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| Protein sequence | MPAFLFPRRG YLGVLAAAFW AVPWVAAQAQ PLTFERAQAL AEQRAPENLA RQAQVASAQQ
AVVPADALPD PKLILGIDNL PIEGPDRYTL NRDSMTMRRI GLMQEVPNGD KRQARRQLAE
ASVVRAEAEQ RAMQLEVKRQ TALSWLDVYY AEHSVGLFDQ LDRQIELLRS TVQSLIAGGS
AQPGELLQAD QEALALQDRR DELSRDVAIA RAKLRRWIGN EADQLLAGDV PSLSLDALHL
QHRLTQHPDL RAASARVGEA SAELNEAVAE KTPDWGVEFA YNNRDNQFGD MVMVQFTFDL
PLFVGTRQGP KINAKQQSVS QMEAEQEVLL RAHQAELESG LAELEQLRRA LARTEKTLIP
LASKRADLEL AAYQAGNSQL ASVITAQREL IEAQLRQIGQ QRKLSQLSAS LYYAYVEGLQ
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