| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2205 |
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| Symbol | |
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| ID | 5109150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2439173 |
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| End bp | 2440075 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640503449 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187697 |
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| Protein GI | 146307232 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.316824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0546535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG TATCCGCAGC AGATCTGTCG ATCTTTCTCA GCATCGCTCA GCACCTCAGT
CTTAGCCGGG CTGCGATTGA CCTCGGGCTC TCGCCATCGG CATTGAGTCA CGCACTACGA
ACACTGGAAA CCCGCCTGGG GGTACGCCTG TTCAACCGCA CGACTCGGAG TGTGGCGCTG
ACCGAGGCCG GTGAACGCCT CTACTCAAGG GTCAGGCCAG CCTTTCGCGA TATCGACGAT
GCCTTGGAGG ATCTCAACAA TTTTCGTGAC AAGCCTTCCG GCAACTTGCG CATTACGGCT
GGCCGGCCAG CGGCTCAGCT GGTGTTGCTG CCAATGGTCA GCAAGTTTCT TCAGGCCTAC
CCAGACGTAC GTGTGGACAT CGTTACCGAC GATGCGCTGG TGGATGTGGT CTCAGCAGGC
TTCGATGCAG GAGTGCGTTT TGGCGAGCGG CTAGAGGCGG ACATGGTATC CCTGGCTATT
GGCCCATACA TGCGCTCGGT GGTCGTGGGC TCGCCAGAAT TTCTACGGCA ATACCCTACT
CCACAGAAAC CCCAGGACCT GCACGGCATA CCTTGCATCC GCCATCGATT TCCCAGCGGT
TCGTTTTATC GCTGGGAGTT CTCTCAGGCC GGCGTAGAGC TGGAAATCGA TGTGGAGGGA
CCTTTGATTC TGAGCGACGT AGGTCTCATG GTTGACCCGG CGCTTCAGGG CGTTGGCCTG
GCCTACGTTT TCGAGGGCAT GGTCAGCGAA CATCTCGCTT CGGGGCGCTT GATCCAGGTA
TTGGAGTCTT GGTGCCCTTT CTATCCCGGA TTGCACCTTT ACTATCCGAG CCGACGACAG
GTTCCGGCGG CGCTCAAGGC CTTCATCGAA TTCGCCCGAG ACACTCGTCG ACATGGCTCA
TGA
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| Protein sequence | MKPVSAADLS IFLSIAQHLS LSRAAIDLGL SPSALSHALR TLETRLGVRL FNRTTRSVAL
TEAGERLYSR VRPAFRDIDD ALEDLNNFRD KPSGNLRITA GRPAAQLVLL PMVSKFLQAY
PDVRVDIVTD DALVDVVSAG FDAGVRFGER LEADMVSLAI GPYMRSVVVG SPEFLRQYPT
PQKPQDLHGI PCIRHRFPSG SFYRWEFSQA GVELEIDVEG PLILSDVGLM VDPALQGVGL
AYVFEGMVSE HLASGRLIQV LESWCPFYPG LHLYYPSRRQ VPAALKAFIE FARDTRRHGS
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